SpatialDE
=========

.. automodule:: SpatialDE

    
    
    

    
    
    .. rubric:: Functions

    .. autosummary::
        :toctree:
    
        fit
        fit_detailed
        fit_fast
        fit_spatial_interactions
        read_spaceranger
        spatial_patterns
        test
        test_spatial_interactions
        tissue_segmentation
    
    

    
    
    .. rubric:: Classes

    .. autosummary::
        :toctree:
        :template: class.rst
    
        GP
        GPControl
        SGPIPM
        SpatialPatternParameters
        SpatialPatterns
        TissueSegmentation
        TissueSegmentationParameters
        TissueSegmentationStatus