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CpG interval report generated on 20/05/20 with pycoMeth 0.4.6
Interval details
| pvalue rank | chromosome | start | end | length | number of samples | number of CpGs | pvalue | adjusted pvalue |
|---|---|---|---|---|---|---|---|---|
| #26 | 17 | 64780064 | 64781774 | 1710 | 3 | 58 | 1.97734e-25 | 7.56333e-23 |
Methylation log-likelihood ratio by CpG position
Distribution of CpG methylation log-likelihood ratio by sample
Closest transcripts TSS
| distance to tss | transcript id | gene id | transcript name | chromosome | start | end | strand | feature type | transcript biotype |
|---|---|---|---|---|---|---|---|---|---|
| 0 | enst00000579125 | sg00000215769 | arhgap27p1-bptfp1-kpna2p3-202 | 17 | 64762687 | 64781707 | - | lnc_RNA | lncrna |
| 0 | enst00000617359 | sg00000278581 | mir6080-201 | 17 | 64780759 | 64780824 | + | miRNA | mirna |
| 0 | enst00000578492 | sg00000215769 | arhgap27p1-bptfp1-kpna2p3-201 | 17 | 64749663 | 64781626 | - | lnc_RNA | lncrna |
| -1127 | enst00000583567 | sg00000265982 | ac103810.3-201 | 17 | 64778842 | 64778937 | - | pseudogenic_transcript | unprocessed_pseudogene |
| -17354 | enst00000579209 | sg00000263647 | bptfp1-201 | 17 | 64761912 | 64762710 | - | pseudogenic_transcript | unprocessed_pseudogene |
| -21461 | enst00000584190 | sg00000266820 | kpna2p3-201 | 17 | 64749918 | 64758603 | - | pseudogenic_transcript | transcribed_unprocessed_pseudogene |
| -29644 | enst00000583145 | sg00000265298 | ac132812.1-201 | 17 | 64750420 | 64751311 | + | pseudogenic_transcript | unprocessed_pseudogene |
| -32572 | enst00000604003 | sg00000270714 | micos10p2-201 | 17 | 64747264 | 64747492 | - | pseudogenic_transcript | processed_pseudogene |
| 40328 | enst00000640925 | sg00000284172 | mir4315-2-201 | 17 | 64822030 | 64822102 | - | miRNA | mirna |
| 44045 | enst00000516433 | sg00000252242 | rnu7-115p-201 | 17 | 64825765 | 64825819 | - | snRNA | snrna |
| 47434 | enst00000582201 | sg00000214176 | plekhm1p1-204 | 17 | 64785259 | 64829208 | - | pseudogenic_transcript | transcribed_unprocessed_pseudogene |
| 55351 | enst00000397718 | sg00000214176 | plekhm1p1-201 | 17 | 64819796 | 64837125 | - | lnc_RNA | processed_transcript |
| 55362 | enst00000584585 | sg00000214176 | plekhm1p1-206 | 17 | 64820694 | 64837136 | - | lnc_RNA | processed_transcript |
| 55365 | enst00000578036 | sg00000214176 | plekhm1p1-202 | 17 | 64779259 | 64837139 | - | lnc_RNA | processed_transcript |
| 55374 | enst00000580919 | sg00000214176 | plekhm1p1-203 | 17 | 64804842 | 64837148 | - | lnc_RNA | processed_transcript |
| 55380 | enst00000582986 | sg00000214176 | plekhm1p1-205 | 17 | 64782719 | 64837154 | - | lnc_RNA | processed_transcript |
| 65612 | enst00000606504 | sg00000272400 | ac103810.9-201 | 17 | 64847386 | 64847728 | + | pseudogenic_transcript | unprocessed_pseudogene |
| 77853 | enst00000583510 | sg00000176809 | lrrc37a3-210 | 17 | 64854371 | 64859627 | - | mRNA | protein_coding |
| 81811 | enst00000334962 | sg00000176809 | lrrc37a3-202 | 17 | 64854364 | 64863585 | - | mRNA | protein_coding |
| 90010 | enst00000582421 | sg00000264840 | rn7sl404p-201 | 17 | 64871504 | 64871784 | - | ncRNA | misc_rna |
| 95256 | enst00000579305 | sg00000176809 | lrrc37a3-206 | 17 | 64860786 | 64877030 | - | lnc_RNA | processed_transcript |
| 99317 | enst00000607821 | sg00000272134 | ac103810.6-201 | 17 | 64881091 | 64881181 | + | pseudogenic_transcript | processed_pseudogene |
| 110954 | enst00000607347 | sg00000272220 | ac103810.7-201 | 17 | 64892728 | 64892845 | + | pseudogenic_transcript | transcribed_processed_pseudogene |
| 110955 | enst00000577938 | sg00000265218 | ac103810.2-201 | 17 | 64892729 | 64896403 | + | lnc_RNA | lncrna |
| 111027 | enst00000584131 | sg00000265218 | ac103810.2-202 | 17 | 64892801 | 64901281 | + | lnc_RNA | lncrna |
| 111050 | enst00000584959 | sg00000265218 | ac103810.2-203 | 17 | 64892824 | 64910180 | + | lnc_RNA | lncrna |
| 113183 | enst00000584788 | sg00000176809 | lrrc37a3-212 | 17 | 64862933 | 64894957 | - | mRNA | protein_coding |
| 113282 | enst00000580464 | sg00000176809 | lrrc37a3-208 | 17 | 64868500 | 64895056 | - | mRNA | protein_coding |
| 115886 | enst00000319651 | sg00000176809 | lrrc37a3-201 | 17 | 64854370 | 64897660 | - | mRNA | protein_coding |
| 116834 | enst00000580439 | sg00000176809 | lrrc37a3-207 | 17 | 64897389 | 64898608 | - | lnc_RNA | processed_transcript |
| 117327 | enst00000400877 | sg00000176809 | lrrc37a3-204 | 17 | 64854362 | 64899101 | - | mRNA | protein_coding |
| -117757 | enst00000262435 | sg00000108854 | smurf2-201 | 17 | 64542282 | 64662307 | - | mRNA | protein_coding |
| 117992 | enst00000581622 | sg00000266644 | ac103810.5-201 | 17 | 64899766 | 64900716 | + | lnc_RNA | lncrna |
| -118136 | enst00000578386 | sg00000108854 | smurf2-203 | 17 | 64545068 | 64661928 | - | mRNA | nonsense_mediated_decay |
| -118152 | enst00000585301 | sg00000108854 | smurf2-207 | 17 | 64554881 | 64661912 | - | mRNA | protein_coding |
| -118167 | enst00000582081 | sg00000108854 | smurf2-206 | 17 | 64542295 | 64661897 | - | mRNA | nonsense_mediated_decay |
| -119202 | enst00000578200 | sg00000108854 | smurf2-202 | 17 | 64560840 | 64660862 | - | lnc_RNA | processed_transcript |
| 124028 | enst00000577487 | sg00000176809 | lrrc37a3-205 | 17 | 64897629 | 64905802 | - | lnc_RNA | processed_transcript |
| 124244 | enst00000606708 | sg00000271974 | rdm1p4-201 | 17 | 64905883 | 64906018 | - | pseudogenic_transcript | transcribed_processed_pseudogene |
| 137011 | enst00000584306 | sg00000176809 | lrrc37a3-211 | 17 | 64854370 | 64918785 | - | mRNA | protein_coding |
| 137694 | enst00000339474 | sg00000176809 | lrrc37a3-203 | 17 | 64854312 | 64919468 | - | mRNA | protein_coding |
| 137706 | enst00000581368 | sg00000176809 | lrrc37a3-209 | 17 | 64860852 | 64919480 | - | mRNA | protein_coding |
| 145860 | enst00000579873 | sg00000264057 | ac103810.1-201 | 17 | 64927634 | 64931286 | + | pseudogenic_transcript | transcribed_unprocessed_pseudogene |
| 145970 | enst00000585187 | sg00000264057 | ac103810.1-202 | 17 | 64927744 | 64930805 | + | lnc_RNA | processed_transcript |
| 148375 | enst00000583052 | sg00000264057 | ac103810.1-203 | 17 | 64930149 | 64934203 | + | lnc_RNA | processed_transcript |
| 158455 | enst00000578601 | sg00000266155 | ac103810.4-201 | 17 | 64936485 | 64940229 | - | pseudogenic_transcript | unprocessed_pseudogene |
| 158828 | enst00000577423 | sg00000280299 | ac037487.4-201 | 17 | 64940602 | 64954177 | + | lnc_RNA | lncrna |
| 158832 | enst00000606688 | sg00000272346 | ac103810.8-201 | 17 | 64940606 | 64940717 | + | pseudogenic_transcript | transcribed_unprocessed_pseudogene |
| 161488 | enst00000583416 | sg00000265912 | ac037487.1-201 | 17 | 64943262 | 64951054 | + | lnc_RNA | lncrna |
| 169835 | enst00000606668 | sg00000272006 | ac037487.3-201 | 17 | 64951498 | 64951609 | - | pseudogenic_transcript | processed_pseudogene |
| 171909 | enst00000413214 | sg00000232457 | slc16a6p1-201 | 17 | 64953683 | 64956546 | + | pseudogenic_transcript | transcribed_unprocessed_pseudogene |
| -181619 | enst00000580246 | sg00000108854 | smurf2-205 | 17 | 64593015 | 64598445 | - | lnc_RNA | retained_intron |
| 191743 | enst00000565833 | sg00000214174 | amz2p1-203 | 17 | 64968222 | 64973517 | - | pseudogenic_transcript | transcribed_unprocessed_pseudogene |
| 193794 | enst00000430983 | sg00000214174 | amz2p1-202 | 17 | 64966550 | 64975568 | - | lnc_RNA | processed_transcript |
| 193802 | enst00000397713 | sg00000214174 | amz2p1-201 | 17 | 64968038 | 64975576 | - | lnc_RNA | processed_transcript |
| -207235 | enst00000606889 | sg00000271779 | ac009994.1-201 | 17 | 64572829 | 64573081 | + | pseudogenic_transcript | processed_pseudogene |
| -216899 | enst00000580072 | sg00000108854 | smurf2-204 | 17 | 64557641 | 64563165 | - | lnc_RNA | retained_intron |
| -243205 | enst00000581980 | sg00000258890 | cep95-214 | 17 | 64536859 | 64537946 | + | lnc_RNA | retained_intron |
| -243462 | enst00000583676 | sg00000258890 | cep95-218 | 17 | 64536602 | 64542461 | + | mRNA | protein_coding |
| -246048 | enst00000581885 | sg00000258890 | cep95-213 | 17 | 64534016 | 64537948 | + | lnc_RNA | retained_intron |
| -247076 | enst00000580285 | sg00000258890 | cep95-211 | 17 | 64532988 | 64537951 | + | lnc_RNA | retained_intron |
| -247363 | enst00000582698 | sg00000258890 | cep95-215 | 17 | 64532701 | 64534643 | + | lnc_RNA | retained_intron |
| -250715 | enst00000579637 | sg00000258890 | cep95-208 | 17 | 64529349 | 64532211 | + | lnc_RNA | retained_intron |
| -252929 | enst00000584857 | sg00000258890 | cep95-219 | 17 | 64527135 | 64532085 | + | lnc_RNA | retained_intron |
| -253024 | enst00000579478 | sg00000258890 | cep95-207 | 17 | 64527040 | 64531101 | + | lnc_RNA | retained_intron |
| -253898 | enst00000583457 | sg00000258890 | cep95-217 | 17 | 64526166 | 64531964 | + | mRNA | protein_coding |
| -253967 | enst00000579117 | sg00000258890 | cep95-206 | 17 | 64526097 | 64531101 | + | lnc_RNA | retained_intron |
| -253989 | enst00000577476 | sg00000258890 | cep95-204 | 17 | 64526075 | 64531928 | + | lnc_RNA | processed_transcript |
| -260743 | enst00000577960 | sg00000258890 | cep95-205 | 17 | 64519321 | 64525834 | + | mRNA | nonsense_mediated_decay |
| -269821 | enst00000582724 | sg00000258890 | cep95-216 | 17 | 64510243 | 64516089 | + | mRNA | protein_coding |
| 270135 | enst00000581796 | sg00000266598 | ac037487.2-201 | 17 | 65051909 | 65053308 | + | lnc_RNA | lncrna |
| -271865 | enst00000584500 | sg00000108654 | ddx5-229 | 17 | 64506927 | 64508199 | - | lnc_RNA | processed_transcript |
| -272352 | enst00000583699 | sg00000108654 | ddx5-226 | 17 | 64506800 | 64507712 | - | lnc_RNA | processed_transcript |
| -272534 | enst00000585111 | sg00000108654 | ddx5-232 | 17 | 64504755 | 64507530 | - | mRNA | protein_coding |
| -272979 | enst00000553956 | sg00000258890 | cep95-202 | 17 | 64507085 | 64537946 | + | mRNA | nonsense_mediated_decay |
| -273024 | enst00000553412 | sg00000258890 | cep95-201 | 17 | 64507040 | 64537942 | + | mRNA | protein_coding |
| -273053 | enst00000581056 | sg00000258890 | cep95-212 | 17 | 64507011 | 64514807 | + | mRNA | protein_coding |
| -273087 | enst00000556440 | sg00000258890 | cep95-203 | 17 | 64506977 | 64537946 | + | mRNA | protein_coding |
| -273089 | enst00000580188 | sg00000258890 | cep95-210 | 17 | 64506975 | 64521474 | + | mRNA | protein_coding |
| -273161 | enst00000581806 | sg00000108654 | ddx5-220 | 17 | 64503839 | 64506903 | - | mRNA | protein_coding |
| -273199 | enst00000579860 | sg00000258890 | cep95-209 | 17 | 64506865 | 64522754 | + | mRNA | nonsense_mediated_decay |
| -273333 | enst00000577922 | sg00000108654 | ddx5-205 | 17 | 64503441 | 64506731 | - | mRNA | protein_coding |
| -273378 | enst00000584279 | sg00000108654 | ddx5-228 | 17 | 64504064 | 64506686 | - | mRNA | protein_coding |
| -273438 | enst00000581697 | sg00000108654 | ddx5-219 | 17 | 64503568 | 64506626 | - | mRNA | protein_coding |
| -273741 | enst00000578400 | sg00000108654 | ddx5-207 | 17 | 64503095 | 64506323 | - | mRNA | nonsense_mediated_decay |
| -273772 | enst00000630471 | sg00000108654 | ddx5-235 | 17 | 64503255 | 64506292 | - | mRNA | protein_coding |
| -273775 | enst00000225792 | sg00000108654 | ddx5-201 | 17 | 64498254 | 64506289 | - | mRNA | protein_coding |
| -273775 | enst00000540698 | sg00000108654 | ddx5-203 | 17 | 64499616 | 64506289 | - | mRNA | nonsense_mediated_decay |
| -273775 | enst00000581693 | sg00000108654 | ddx5-218 | 17 | 64499616 | 64506289 | - | mRNA | nonsense_mediated_decay |
| -273775 | enst00000581230 | sg00000108654 | ddx5-215 | 17 | 64499616 | 64506289 | - | lnc_RNA | retained_intron |
| -273775 | enst00000585060 | sg00000108654 | ddx5-231 | 17 | 64504060 | 64506289 | - | mRNA | protein_coding |
| -273775 | enst00000585223 | sg00000108654 | ddx5-233 | 17 | 64504358 | 64506289 | - | lnc_RNA | retained_intron |
| -273777 | enst00000450599 | sg00000108654 | ddx5-202 | 17 | 64499622 | 64506287 | - | mRNA | protein_coding |
| 274000 | enst00000541118 | sg00000120063 | gna13-202 | 17 | 65013788 | 65055774 | - | mRNA | protein_coding |
| -274108 | enst00000578804 | sg00000108654 | ddx5-210 | 17 | 64499914 | 64505956 | - | mRNA | protein_coding |
| -274468 | enst00000583239 | sg00000108654 | ddx5-224 | 17 | 64503995 | 64505596 | - | mRNA | protein_coding |
| -274613 | enst00000579091 | sg00000108654 | ddx5-211 | 17 | 64504015 | 64505451 | - | mRNA | protein_coding |
| -274674 | enst00000578190 | sg00000108654 | ddx5-206 | 17 | 64503856 | 64505390 | - | mRNA | protein_coding |
| -274783 | enst00000583212 | sg00000108654 | ddx5-223 | 17 | 64504078 | 64505281 | - | mRNA | protein_coding |
| 274966 | enst00000439174 | sg00000120063 | gna13-201 | 17 | 65009289 | 65056740 | - | mRNA | protein_coding |
| -275775 | enst00000583562 | sg00000108654 | ddx5-225 | 17 | 64503720 | 64504289 | - | lnc_RNA | retained_intron |
| -276043 | enst00000583894 | sg00000108654 | ddx5-227 | 17 | 64502965 | 64504021 | - | lnc_RNA | retained_intron |
| -276216 | enst00000584549 | sg00000108654 | ddx5-230 | 17 | 64502730 | 64503848 | - | lnc_RNA | retained_intron |
| -276241 | enst00000577787 | sg00000108654 | ddx5-204 | 17 | 64502585 | 64503823 | - | mRNA | protein_coding |
| -276380 | enst00000582326 | sg00000108654 | ddx5-221 | 17 | 64502930 | 64503684 | - | lnc_RNA | retained_intron |
| -276418 | enst00000583201 | sg00000108654 | ddx5-222 | 17 | 64502921 | 64503646 | - | lnc_RNA | retained_intron |
| -276503 | enst00000581551 | sg00000108654 | ddx5-217 | 17 | 64502900 | 64503561 | - | lnc_RNA | retained_intron |
| -276629 | enst00000579996 | sg00000108654 | ddx5-213 | 17 | 64502070 | 64503435 | - | mRNA | protein_coding |
| -276818 | enst00000579461 | sg00000108654 | ddx5-212 | 17 | 64501876 | 64503246 | - | lnc_RNA | retained_intron |
| -276968 | enst00000578491 | sg00000108654 | ddx5-208 | 17 | 64500824 | 64503096 | - | lnc_RNA | processed_transcript |
| -277162 | enst00000585317 | sg00000108654 | ddx5-234 | 17 | 64501888 | 64502902 | - | lnc_RNA | retained_intron |
| -277714 | enst00000578758 | sg00000108654 | ddx5-209 | 17 | 64500134 | 64502350 | - | lnc_RNA | retained_intron |
| -278162 | enst00000580026 | sg00000108654 | ddx5-214 | 17 | 64500110 | 64501902 | - | lnc_RNA | processed_transcript |
| -278367 | enst00000581237 | sg00000108654 | ddx5-216 | 17 | 64500185 | 64501697 | - | lnc_RNA | processed_transcript |
| -278751 | enst00000579212 | sg00000284368 | mir5047-201 | 17 | 64501214 | 64501313 | - | miRNA | mirna |
| -279225 | enst00000581130 | sg00000284564 | mir3064-201 | 17 | 64500774 | 64500839 | - | miRNA | mirna |
| -283010 | enst00000539111 | sg00000256525 | polg2-201 | 17 | 64477785 | 64497054 | - | mRNA | protein_coding |
| -283045 | enst00000585141 | sg00000256525 | polg2-210 | 17 | 64485158 | 64497019 | - | lnc_RNA | retained_intron |
| -283125 | enst00000671755 | sg00000256525 | polg2-211 | 17 | 64477812 | 64496939 | - | mRNA | nonsense_mediated_decay |
| -283125 | enst00000585104 | sg00000256525 | polg2-209 | 17 | 64477852 | 64496939 | - | lnc_RNA | processed_transcript |
| -283125 | enst00000673460 | sg00000256525 | polg2-212 | 17 | 64477840 | 64496939 | - | mRNA | nonsense_mediated_decay |
| -283309 | enst00000578997 | sg00000256525 | polg2-204 | 17 | 64490862 | 64496755 | - | mRNA | nonsense_mediated_decay |
| -287043 | enst00000580893 | sg00000256525 | polg2-206 | 17 | 64490469 | 64493021 | - | lnc_RNA | processed_transcript |
| -287154 | enst00000578687 | sg00000256525 | polg2-203 | 17 | 64486989 | 64492910 | - | lnc_RNA | processed_transcript |
| -287344 | enst00000581355 | sg00000256525 | polg2-207 | 17 | 64477787 | 64492720 | - | mRNA | protein_coding |
| -288541 | enst00000538774 | sg00000256826 | atp5mfp4-201 | 17 | 64491523 | 64491789 | + | pseudogenic_transcript | processed_pseudogene |
| -289095 | enst00000577506 | sg00000256525 | polg2-202 | 17 | 64480289 | 64490969 | - | lnc_RNA | processed_transcript |
| -292590 | enst00000582501 | sg00000256525 | polg2-208 | 17 | 64477964 | 64487474 | - | lnc_RNA | processed_transcript |
| -295834 | enst00000580490 | sg00000256525 | polg2-205 | 17 | 64480348 | 64484230 | - | lnc_RNA | processed_transcript |
| -314612 | enst00000620304 | sg00000271605 | milr1-207 | 17 | 64465452 | 64467935 | + | mRNA | protein_coding |
| -314612 | enst00000605096 | sg00000271605 | milr1-201 | 17 | 64465452 | 64468643 | + | mRNA | protein_coding |
| 319038 | enst00000638125 | sg00000108370 | rgs9-212 | 17 | 65100812 | 65113130 | + | lnc_RNA | processed_transcript |
| 319056 | enst00000637818 | sg00000108370 | rgs9-211 | 17 | 65100830 | 65119585 | + | lnc_RNA | processed_transcript |
| 319104 | enst00000582940 | sg00000108370 | rgs9-207 | 17 | 65100878 | 65111113 | + | lnc_RNA | processed_transcript |
| 319212 | enst00000635833 | sg00000108370 | rgs9-210 | 17 | 65100986 | 65227690 | + | mRNA | protein_coding |
| -330895 | enst00000616498 | sg00000271605 | milr1-204 | 17 | 64449169 | 64467617 | + | mRNA | protein_coding |
| -330895 | enst00000612535 | sg00000271605 | milr1-202 | 17 | 64449169 | 64467617 | + | mRNA | protein_coding |
| -330934 | enst00000617071 | sg00000271605 | milr1-205 | 17 | 64449130 | 64457592 | + | mRNA | non_stop_decay |
| -330949 | enst00000619286 | sg00000271605 | milr1-206 | 17 | 64449115 | 64468643 | + | mRNA | protein_coding |
| -331027 | enst00000615220 | sg00000271605 | milr1-203 | 17 | 64449037 | 64467649 | + | mRNA | protein_coding |
| -354894 | enst00000581165 | sg00000265031 | ac234063.2-201 | 17 | 64425069 | 64425170 | - | miRNA | mirna |
| 355596 | enst00000262406 | sg00000108370 | rgs9-201 | 17 | 65137370 | 65227703 | + | mRNA | protein_coding |
| 355657 | enst00000583473 | sg00000108370 | rgs9-208 | 17 | 65137431 | 65158791 | + | lnc_RNA | retained_intron |
| 355674 | enst00000443584 | sg00000108370 | rgs9-202 | 17 | 65137448 | 65225588 | + | mRNA | protein_coding |
| 355680 | enst00000584234 | sg00000108370 | rgs9-209 | 17 | 65137454 | 65227678 | + | mRNA | nonsense_mediated_decay |
| 355695 | enst00000449996 | sg00000108370 | rgs9-203 | 17 | 65137469 | 65227703 | + | mRNA | protein_coding |
| 355750 | enst00000581175 | sg00000108370 | rgs9-206 | 17 | 65137524 | 65210662 | + | lnc_RNA | retained_intron |
| 355818 | enst00000577186 | sg00000108370 | rgs9-204 | 17 | 65137592 | 65180037 | + | lnc_RNA | processed_transcript |
| -366288 | enst00000564866 | sg00000261371 | pecam1-204 | 17 | 64375051 | 64413776 | - | mRNA | protein_coding |
| -381673 | enst00000569967 | sg00000261371 | pecam1-209 | 17 | 64375338 | 64398391 | - | mRNA | protein_coding |
| -389204 | enst00000563924 | sg00000261371 | pecam1-203 | 17 | 64319415 | 64390860 | - | mRNA | protein_coding |
| -389472 | enst00000563523 | sg00000261371 | pecam1-202 | 17 | 64375176 | 64390592 | - | mRNA | protein_coding |
| -389801 | enst00000497848 | sg00000239823 | ac234063.1-201 | 17 | 64390158 | 64390263 | - | ncRNA | misc_rna |
| -400972 | enst00000561739 | sg00000261371 | pecam1-201 | 17 | 64375187 | 64379092 | - | lnc_RNA | processed_transcript |
| -401190 | enst00000569530 | sg00000261371 | pecam1-208 | 17 | 64377574 | 64378874 | - | lnc_RNA | processed_transcript |
| -401197 | enst00000566616 | sg00000261371 | pecam1-206 | 17 | 64375188 | 64378867 | - | lnc_RNA | processed_transcript |
| 403708 | enst00000582031 | sg00000265883 | ac060771.1-201 | 17 | 65185319 | 65185482 | - | pseudogenic_transcript | processed_pseudogene |
| 406930 | enst00000577595 | sg00000108370 | rgs9-205 | 17 | 65188704 | 65227692 | + | lnc_RNA | retained_intron |
| -409649 | enst00000566422 | sg00000261371 | pecam1-205 | 17 | 64363348 | 64370415 | - | lnc_RNA | processed_transcript |
| -409819 | enst00000568702 | sg00000261371 | pecam1-207 | 17 | 64363286 | 64370245 | - | lnc_RNA | processed_transcript |
| -471374 | enst00000461109 | sg00000256358 | rpl31p57-201 | 17 | 64308316 | 64308690 | - | pseudogenic_transcript | processed_pseudogene |
Source file: /hps/research1/birney/users/adrien/analyses/cancer_DNA_promethion/run_1_2_3_4/DNA_pipeline_2/results/methylation/pycometh_meth_comp_CGI_3/out.tsv.gz
MD5 hash: 9aa0e3f69cb4e12345c3758eb68a5efc