PycoMeth
Documentation
GitHub
CpG interval report generated on 20/05/20 with pycoMeth 0.4.6
Interval details
| pvalue rank | chromosome | start | end | length | number of samples | number of CpGs | pvalue | adjusted pvalue |
|---|---|---|---|---|---|---|---|---|
| #68 | 15 | 65395552 | 65397126 | 1574 | 3 | 47 | 6.47677e-20 | 9.47227e-18 |
Methylation log-likelihood ratio by CpG position
Distribution of CpG methylation log-likelihood ratio by sample
Closest transcripts TSS
| distance to tss | transcript id | gene id | transcript name | chromosome | start | end | strand | feature type | transcript biotype |
|---|---|---|---|---|---|---|---|---|---|
| 0 | enst00000559327 | sg00000103742 | igdcc4-204 | 15 | 65381487 | 65396429 | - | lnc_RNA | retained_intron |
| -8907 | enst00000560319 | sg00000103742 | igdcc4-205 | 15 | 65385616 | 65386645 | - | lnc_RNA | retained_intron |
| -9521 | enst00000561309 | sg00000103742 | igdcc4-206 | 15 | 65384848 | 65386031 | - | lnc_RNA | retained_intron |
| -9782 | enst00000558048 | sg00000103742 | igdcc4-202 | 15 | 65381487 | 65385770 | - | lnc_RNA | processed_transcript |
| 13959 | enst00000558819 | sg00000103742 | igdcc4-203 | 15 | 65410366 | 65411085 | - | lnc_RNA | retained_intron |
| -17550 | enst00000327987 | sg00000174498 | igdcc3-201 | 15 | 65327127 | 65378002 | - | mRNA | protein_coding |
| -20252 | enst00000559947 | sg00000174498 | igdcc3-205 | 15 | 65373489 | 65375300 | - | lnc_RNA | retained_intron |
| 25821 | enst00000352385 | sg00000103742 | igdcc4-201 | 15 | 65381484 | 65422947 | - | mRNA | protein_coding |
| -39180 | enst00000558354 | sg00000174498 | igdcc3-202 | 15 | 65329579 | 65356372 | - | mRNA | protein_coding |
| -39641 | enst00000559058 | sg00000174498 | igdcc3-203 | 15 | 65334771 | 65355911 | - | mRNA | protein_coding |
| 58565 | enst00000560048 | sg00000074603 | dpp8-212 | 15 | 65450739 | 65455691 | - | lnc_RNA | processed_transcript |
| -60911 | enst00000559231 | sg00000174498 | igdcc3-204 | 15 | 65331104 | 65334641 | - | lnc_RNA | processed_transcript |
| 61448 | enst00000605455 | sg00000270690 | ac105129.3-201 | 15 | 65458574 | 65459534 | + | pseudogenic_transcript | processed_pseudogene |
| 66719 | enst00000560597 | sg00000074603 | dpp8-215 | 15 | 65455394 | 65463845 | - | lnc_RNA | retained_intron |
| 70029 | enst00000558363 | sg00000074603 | dpp8-206 | 15 | 65456287 | 65467155 | - | lnc_RNA | processed_transcript |
| 70066 | enst00000558786 | sg00000074603 | dpp8-209 | 15 | 65446637 | 65467192 | - | mRNA | protein_coding |
| 78488 | enst00000560250 | sg00000259232 | ac105129.1-201 | 15 | 65475318 | 65475614 | - | pseudogenic_transcript | processed_pseudogene |
| -90875 | enst00000363286 | sg00000200156 | rnu5b-1-201 | 15 | 65304677 | 65304792 | + | snRNA | snrna |
| 93160 | enst00000558559 | sg00000074603 | dpp8-208 | 15 | 65452044 | 65490286 | - | mRNA | protein_coding |
| -93630 | enst00000559536 | sg00000259346 | ac105129.2-201 | 15 | 65301922 | 65302311 | + | pseudogenic_transcript | processed_pseudogene |
| -94934 | enst00000558873 | sg00000138617 | parp16-203 | 15 | 65266577 | 65300618 | - | lnc_RNA | processed_transcript |
| -99501 | enst00000362698 | sg00000199568 | rnu5a-1-201 | 15 | 65296051 | 65296166 | + | snRNA | snrna |
| 105615 | enst00000516408 | sg00000252217 | ac011846.1-201 | 15 | 65502741 | 65502836 | + | ncRNA | misc_rna |
| -108680 | enst00000261888 | sg00000138617 | parp16-201 | 15 | 65258094 | 65286872 | - | mRNA | protein_coding |
| -108709 | enst00000444347 | sg00000138617 | parp16-202 | 15 | 65258096 | 65286843 | - | mRNA | protein_coding |
| -109060 | enst00000649807 | sg00000138617 | parp16-206 | 15 | 65258099 | 65286492 | - | mRNA | protein_coding |
| -109186 | enst00000560149 | sg00000138617 | parp16-205 | 15 | 65259286 | 65286366 | - | lnc_RNA | processed_transcript |
| -109961 | enst00000384176 | sg00000206903 | snora24b-201 | 15 | 65285461 | 65285591 | - | snoRNA | snorna |
| 115705 | enst00000558529 | sg00000074603 | dpp8-207 | 15 | 65497951 | 65512831 | - | mRNA | protein_coding |
| 118678 | enst00000559233 | sg00000074603 | dpp8-210 | 15 | 65446740 | 65515804 | - | mRNA | protein_coding |
| 118678 | enst00000395652 | sg00000074603 | dpp8-205 | 15 | 65446741 | 65515804 | - | mRNA | nonsense_mediated_decay |
| 120147 | enst00000341861 | sg00000074603 | dpp8-203 | 15 | 65442463 | 65517273 | - | mRNA | protein_coding |
| 120212 | enst00000560436 | sg00000074603 | dpp8-214 | 15 | 65507303 | 65517338 | - | mRNA | protein_coding |
| 120502 | enst00000560194 | sg00000074603 | dpp8-213 | 15 | 65511961 | 65517628 | - | lnc_RNA | processed_transcript |
| 120537 | enst00000559526 | sg00000074603 | dpp8-211 | 15 | 65497917 | 65517663 | - | mRNA | protein_coding |
| 120554 | enst00000358939 | sg00000074603 | dpp8-204 | 15 | 65446617 | 65517680 | - | mRNA | protein_coding |
| 120555 | enst00000560665 | sg00000074603 | dpp8-216 | 15 | 65512302 | 65517681 | - | mRNA | protein_coding |
| 120563 | enst00000300141 | sg00000074603 | dpp8-201 | 15 | 65442467 | 65517689 | - | mRNA | protein_coding |
| 120578 | enst00000321147 | sg00000074603 | dpp8-202 | 15 | 65446621 | 65517704 | - | mRNA | protein_coding |
| 133292 | enst00000562901 | sg00000074696 | hacd3-205 | 15 | 65530418 | 65576673 | + | mRNA | protein_coding |
| 133337 | enst00000261875 | sg00000074696 | hacd3-201 | 15 | 65530463 | 65578349 | + | mRNA | protein_coding |
| 133356 | enst00000442729 | sg00000074696 | hacd3-202 | 15 | 65530482 | 65576637 | + | mRNA | protein_coding |
| 133364 | enst00000565299 | sg00000074696 | hacd3-206 | 15 | 65530490 | 65576499 | + | mRNA | protein_coding |
| 133379 | enst00000568793 | sg00000074696 | hacd3-210 | 15 | 65530505 | 65577062 | + | mRNA | protein_coding |
| 133462 | enst00000566239 | sg00000074696 | hacd3-208 | 15 | 65530588 | 65551937 | + | lnc_RNA | retained_intron |
| 133628 | enst00000566074 | sg00000074696 | hacd3-207 | 15 | 65530754 | 65576955 | + | mRNA | protein_coding |
| 134134 | enst00000566511 | sg00000074696 | hacd3-209 | 15 | 65531260 | 65576977 | + | mRNA | protein_coding |
| -134545 | enst00000559805 | sg00000138617 | parp16-204 | 15 | 65234460 | 65261007 | - | mRNA | nonsense_mediated_decay |
| 153693 | enst00000569894 | sg00000074696 | hacd3-211 | 15 | 65550819 | 65576726 | + | mRNA | protein_coding |
| 153900 | enst00000562832 | sg00000074696 | hacd3-204 | 15 | 65551026 | 65570199 | + | mRNA | protein_coding |
| 156061 | enst00000384718 | sg00000207449 | rnu6-19p-201 | 15 | 65553081 | 65553187 | - | snRNA | snrna |
| -165691 | enst00000364839 | sg00000201709 | rnu6-686p-201 | 15 | 65229861 | 65229967 | + | snRNA | snrna |
| 167096 | enst00000624437 | sg00000074696 | hacd3-212 | 15 | 65564222 | 65566967 | + | unconfirmed_transcript | tec |
| -168855 | enst00000625124 | sg00000279268 | ac068213.1-201 | 15 | 65226472 | 65226697 | - | unconfirmed_transcript | tec |
| 177139 | enst00000561763 | sg00000074696 | hacd3-203 | 15 | 65574265 | 65576499 | + | lnc_RNA | processed_transcript |
| -184079 | enst00000261883 | sg00000138615 | cilp-201 | 15 | 65194760 | 65211473 | - | mRNA | protein_coding |
| 189832 | enst00000569180 | sg00000138614 | ints14-214 | 15 | 65584829 | 65586958 | - | lnc_RNA | processed_transcript |
| 201739 | enst00000563729 | sg00000138614 | ints14-207 | 15 | 65595765 | 65598865 | - | lnc_RNA | retained_intron |
| -210210 | enst00000558958 | sg00000166855 | clpx-203 | 15 | 65156686 | 65185342 | - | lnc_RNA | retained_intron |
| -210210 | enst00000300107 | sg00000166855 | clpx-201 | 15 | 65148219 | 65185342 | - | mRNA | protein_coding |
| 210283 | enst00000569004 | sg00000138614 | ints14-213 | 15 | 65595733 | 65607409 | - | mRNA | nonsense_mediated_decay |
| -210336 | enst00000559152 | sg00000166855 | clpx-204 | 15 | 65150514 | 65185216 | - | mRNA | nonsense_mediated_decay |
| -211068 | enst00000559218 | sg00000166855 | clpx-205 | 15 | 65166651 | 65184484 | - | mRNA | protein_coding |
| 213995 | enst00000567744 | sg00000138614 | ints14-209 | 15 | 65579027 | 65611121 | - | mRNA | protein_coding |
| 213995 | enst00000568573 | sg00000138614 | ints14-212 | 15 | 65599883 | 65611121 | - | mRNA | protein_coding |
| 213997 | enst00000562830 | sg00000138614 | ints14-206 | 15 | 65605183 | 65611123 | - | mRNA | protein_coding |
| 214005 | enst00000561769 | sg00000138614 | ints14-205 | 15 | 65599810 | 65611131 | - | mRNA | protein_coding |
| 214005 | enst00000569491 | sg00000138614 | ints14-215 | 15 | 65579097 | 65611131 | - | mRNA | protein_coding |
| 214010 | enst00000573314 | sg00000138614 | ints14-217 | 15 | 65578753 | 65611136 | - | mRNA | nonsense_mediated_decay |
| 214013 | enst00000569565 | sg00000138614 | ints14-216 | 15 | 65605203 | 65611139 | - | mRNA | nonsense_mediated_decay |
| 214022 | enst00000567940 | sg00000138614 | ints14-211 | 15 | 65599897 | 65611148 | - | mRNA | nonsense_mediated_decay |
| 214028 | enst00000564306 | sg00000138614 | ints14-208 | 15 | 65599377 | 65611154 | - | lnc_RNA | retained_intron |
| 214097 | enst00000567923 | sg00000138614 | ints14-210 | 15 | 65599847 | 65611223 | - | mRNA | protein_coding |
| 214116 | enst00000420799 | sg00000138614 | ints14-202 | 15 | 65579147 | 65611242 | - | mRNA | protein_coding |
| 214119 | enst00000313182 | sg00000138614 | ints14-201 | 15 | 65578782 | 65611245 | - | mRNA | protein_coding |
| 214132 | enst00000431261 | sg00000138614 | ints14-203 | 15 | 65579065 | 65611258 | - | mRNA | protein_coding |
| 214163 | enst00000652388 | sg00000138614 | ints14-218 | 15 | 65578760 | 65611289 | - | mRNA | protein_coding |
| 214163 | enst00000442903 | sg00000138614 | ints14-204 | 15 | 65579248 | 65611289 | - | mRNA | protein_coding |
| 214240 | enst00000434116 | sg00000074621 | slc24a1-205 | 15 | 65611366 | 65652929 | + | lnc_RNA | retained_intron |
| 214252 | enst00000425561 | sg00000074621 | slc24a1-204 | 15 | 65611378 | 65625857 | + | lnc_RNA | processed_transcript |
| 214279 | enst00000537259 | sg00000074621 | slc24a1-209 | 15 | 65611405 | 65660995 | + | mRNA | protein_coding |
| 214686 | enst00000535950 | sg00000074621 | slc24a1-208 | 15 | 65611812 | 65624018 | + | lnc_RNA | processed_transcript |
| 224806 | enst00000339868 | sg00000074621 | slc24a1-202 | 15 | 65621932 | 65656260 | + | mRNA | protein_coding |
| 224812 | enst00000261892 | sg00000074621 | slc24a1-201 | 15 | 65621938 | 65656260 | + | mRNA | protein_coding |
| 224883 | enst00000544319 | sg00000074621 | slc24a1-211 | 15 | 65622009 | 65654080 | + | mRNA | protein_coding |
| 226873 | enst00000399033 | sg00000074621 | slc24a1-203 | 15 | 65623999 | 65654110 | + | mRNA | protein_coding |
| 226955 | enst00000546330 | sg00000074621 | slc24a1-212 | 15 | 65624081 | 65654079 | + | mRNA | protein_coding |
| -232905 | enst00000558103 | sg00000166855 | clpx-202 | 15 | 65158191 | 65162647 | - | lnc_RNA | retained_intron |
| -239701 | enst00000560166 | sg00000166855 | clpx-206 | 15 | 65154679 | 65155851 | - | lnc_RNA | retained_intron |
| 245779 | enst00000449142 | sg00000074621 | slc24a1-206 | 15 | 65642905 | 65654191 | + | lnc_RNA | processed_transcript |
| 246802 | enst00000539516 | sg00000074621 | slc24a1-210 | 15 | 65643928 | 65650608 | + | lnc_RNA | retained_intron |
| 255613 | enst00000505666 | sg00000074621 | slc24a1-207 | 15 | 65652739 | 65655513 | + | mRNA | protein_coding |
| 258959 | enst00000613686 | sg00000275638 | ac011939.3-201 | 15 | 65655620 | 65656085 | - | lnc_RNA | lncrna |
| -261744 | enst00000204549 | sg00000090470 | pdcd7-201 | 15 | 65117379 | 65133808 | - | mRNA | protein_coding |
| 264803 | enst00000561863 | sg00000174485 | dennd4a-203 | 15 | 65658046 | 65661929 | - | mRNA | protein_coding |
| -266382 | enst00000560313 | sg00000090470 | pdcd7-203 | 15 | 65118759 | 65129170 | - | mRNA | protein_coding |
| 267830 | enst00000562540 | sg00000174485 | dennd4a-205 | 15 | 65661821 | 65664956 | - | lnc_RNA | retained_intron |
| -275778 | enst00000559051 | sg00000090470 | pdcd7-202 | 15 | 65118964 | 65119774 | - | lnc_RNA | retained_intron |
| -280355 | enst00000559089 | sg00000246922 | ubap1l-203 | 15 | 65092770 | 65115197 | - | mRNA | protein_coding |
| -289193 | enst00000502113 | sg00000246922 | ubap1l-201 | 15 | 65093006 | 65106359 | - | mRNA | protein_coding |
| -289311 | enst00000558802 | sg00000246922 | ubap1l-202 | 15 | 65093048 | 65106241 | - | mRNA | nonsense_mediated_decay |
| -290018 | enst00000560906 | sg00000259258 | ac013553.1-201 | 15 | 65105534 | 65105800 | + | pseudogenic_transcript | processed_pseudogene |
| 293412 | enst00000567323 | sg00000174485 | dennd4a-207 | 15 | 65680635 | 65690538 | - | lnc_RNA | processed_transcript |
| -293924 | enst00000561387 | sg00000246922 | ubap1l-204 | 15 | 65093009 | 65101628 | - | lnc_RNA | retained_intron |
| 299810 | enst00000459325 | sg00000238311 | snord13e-201 | 15 | 65696833 | 65696936 | - | snoRNA | snorna |
| 304675 | enst00000562028 | sg00000174485 | dennd4a-204 | 15 | 65696316 | 65701801 | - | lnc_RNA | retained_intron |
| -311889 | enst00000619781 | sg00000278737 | ac013553.4-201 | 15 | 65083042 | 65083663 | - | lnc_RNA | lncrna |
| -318736 | enst00000432196 | sg00000234438 | kbtbd13-201 | 15 | 65076816 | 65079939 | + | mRNA | protein_coding |
| -318862 | enst00000434605 | sg00000103710 | rasl12-203 | 15 | 65054777 | 65076690 | - | mRNA | protein_coding |
| 322206 | enst00000582784 | sg00000264737 | mir4511-201 | 15 | 65719246 | 65719332 | - | miRNA | mirna |
| -327561 | enst00000220062 | sg00000103710 | rasl12-201 | 15 | 65053337 | 65067991 | - | mRNA | protein_coding |
| -327609 | enst00000421977 | sg00000103710 | rasl12-202 | 15 | 65054228 | 65067943 | - | mRNA | protein_coding |
| 328928 | enst00000569304 | sg00000103769 | rab11a-208 | 15 | 65726054 | 65887923 | + | lnc_RNA | processed_transcript |
| -345750 | enst00000612943 | sg00000277351 | ac013553.3-201 | 15 | 65049188 | 65049802 | - | lnc_RNA | lncrna |
| -350165 | enst00000334287 | sg00000186198 | slc51b-201 | 15 | 65045387 | 65053397 | + | mRNA | protein_coding |
| 364311 | enst00000635620 | sg00000174485 | dennd4a-209 | 15 | 65661815 | 65761437 | - | mRNA | protein_coding |
| -365913 | enst00000543678 | sg00000103707 | mtfmt-202 | 15 | 65015833 | 65029639 | - | mRNA | nonsense_mediated_decay |
| -365913 | enst00000220058 | sg00000103707 | mtfmt-201 | 15 | 65001512 | 65029639 | - | mRNA | protein_coding |
| -365936 | enst00000558460 | sg00000103707 | mtfmt-203 | 15 | 65002578 | 65029616 | - | mRNA | nonsense_mediated_decay |
| -365954 | enst00000560717 | sg00000103707 | mtfmt-206 | 15 | 65002996 | 65029598 | - | mRNA | nonsense_mediated_decay |
| -365978 | enst00000558614 | sg00000103707 | mtfmt-204 | 15 | 65016255 | 65029574 | - | lnc_RNA | retained_intron |
| -366020 | enst00000559633 | sg00000103707 | mtfmt-205 | 15 | 65026748 | 65029532 | - | lnc_RNA | retained_intron |
| -368621 | enst00000561025 | sg00000103707 | mtfmt-207 | 15 | 65021514 | 65026931 | - | lnc_RNA | processed_transcript |
| -369464 | enst00000604244 | sg00000270218 | ac013553.2-201 | 15 | 65026088 | 65026676 | + | pseudogenic_transcript | processed_pseudogene |
| 370272 | enst00000567396 | sg00000261544 | ac011939.2-201 | 15 | 65766460 | 65767398 | - | lnc_RNA | lncrna |
| 375013 | enst00000567680 | sg00000259924 | ac011939.1-201 | 15 | 65771176 | 65772139 | - | pseudogenic_transcript | processed_pseudogene |
| 394998 | enst00000431932 | sg00000174485 | dennd4a-201 | 15 | 65661777 | 65792124 | - | mRNA | protein_coding |
| 394998 | enst00000443035 | sg00000174485 | dennd4a-202 | 15 | 65659123 | 65792124 | - | mRNA | protein_coding |
| 395081 | enst00000568515 | sg00000174485 | dennd4a-208 | 15 | 65715075 | 65792207 | - | lnc_RNA | retained_intron |
| 395167 | enst00000564674 | sg00000174485 | dennd4a-206 | 15 | 65691458 | 65792293 | - | mRNA | protein_coding |
| 395321 | enst00000568850 | sg00000103769 | rab11a-207 | 15 | 65792447 | 65877819 | + | lnc_RNA | processed_transcript |
| 395321 | enst00000563580 | sg00000103769 | rab11a-202 | 15 | 65792447 | 65859751 | + | lnc_RNA | processed_transcript |
| -405242 | enst00000559677 | sg00000090487 | spg21-210 | 15 | 64976473 | 64990310 | - | mRNA | protein_coding |
| -405606 | enst00000560564 | sg00000090487 | spg21-211 | 15 | 64974666 | 64989946 | - | lnc_RNA | processed_transcript |
| -405638 | enst00000204566 | sg00000090487 | spg21-201 | 15 | 64963022 | 64989914 | - | mRNA | protein_coding |
| -405641 | enst00000558339 | sg00000090487 | spg21-205 | 15 | 64982933 | 64989911 | - | lnc_RNA | processed_transcript |
| -405641 | enst00000416889 | sg00000090487 | spg21-202 | 15 | 64963204 | 64989911 | - | mRNA | protein_coding |
| -405737 | enst00000561078 | sg00000090487 | spg21-213 | 15 | 64963056 | 64989815 | - | mRNA | nonsense_mediated_decay |
| -405845 | enst00000558765 | sg00000090487 | spg21-207 | 15 | 64974602 | 64989707 | - | mRNA | protein_coding |
| -406026 | enst00000561088 | sg00000090487 | spg21-214 | 15 | 64988732 | 64989526 | - | lnc_RNA | retained_intron |
| -406046 | enst00000557795 | sg00000090487 | spg21-204 | 15 | 64974630 | 64989506 | - | mRNA | protein_coding |
| -406056 | enst00000558415 | sg00000090487 | spg21-206 | 15 | 64980930 | 64989496 | - | mRNA | protein_coding |
| -406078 | enst00000433215 | sg00000090487 | spg21-203 | 15 | 64963027 | 64989474 | - | mRNA | protein_coding |
| -406627 | enst00000560878 | sg00000090487 | spg21-212 | 15 | 64980969 | 64988925 | - | mRNA | protein_coding |
| -408076 | enst00000558943 | sg00000090487 | spg21-208 | 15 | 64980874 | 64987476 | - | mRNA | protein_coding |
| -413925 | enst00000559199 | sg00000090487 | spg21-209 | 15 | 64963027 | 64981627 | - | mRNA | protein_coding |
| 420355 | enst00000503999 | sg00000249271 | hnrnpa1p44-201 | 15 | 65816302 | 65817481 | - | pseudogenic_transcript | processed_pseudogene |
| -444117 | enst00000619654 | sg00000274383 | ac103691.1-201 | 15 | 64950916 | 64951435 | - | lnc_RNA | lncrna |
| 446358 | enst00000636829 | sg00000283249 | ac084854.1-201 | 15 | 65843484 | 65843558 | + | snRNA | snrna |
| -451880 | enst00000618824 | sg00000275332 | ac103691.2-201 | 15 | 64943240 | 64943672 | - | lnc_RNA | lncrna |
| -461439 | enst00000611260 | sg00000166839 | ankdd1a-209 | 15 | 64934113 | 64943756 | + | lnc_RNA | retained_intron |
| 472330 | enst00000564910 | sg00000103769 | rab11a-203 | 15 | 65869456 | 65888247 | + | mRNA | protein_coding |
| 472338 | enst00000566233 | sg00000103769 | rab11a-205 | 15 | 65869464 | 65887736 | + | mRNA | protein_coding |
| 472365 | enst00000565075 | sg00000103769 | rab11a-204 | 15 | 65869491 | 65887859 | + | mRNA | protein_coding |
| 472365 | enst00000261890 | sg00000103769 | rab11a-201 | 15 | 65869491 | 65891989 | + | mRNA | protein_coding |
| 472415 | enst00000569896 | sg00000103769 | rab11a-209 | 15 | 65869541 | 65888635 | + | mRNA | protein_coding |
| 472887 | enst00000567671 | sg00000103769 | rab11a-206 | 15 | 65870013 | 65887791 | + | mRNA | protein_coding |
| -473625 | enst00000395723 | sg00000166839 | ankdd1a-203 | 15 | 64921927 | 64957238 | + | mRNA | protein_coding |
| -473625 | enst00000395720 | sg00000166839 | ankdd1a-202 | 15 | 64921927 | 64951261 | + | mRNA | protein_coding |
| -473625 | enst00000620154 | sg00000166839 | ankdd1a-210 | 15 | 64921927 | 64958691 | + | mRNA | nonsense_mediated_decay |
| -479687 | enst00000483400 | sg00000166839 | ankdd1a-204 | 15 | 64915865 | 64932514 | + | mRNA | protein_coding |
| -483624 | enst00000513267 | sg00000166839 | ankdd1a-208 | 15 | 64911928 | 64932320 | + | mRNA | nonsense_mediated_decay |
| -483634 | enst00000496660 | sg00000166839 | ankdd1a-207 | 15 | 64911918 | 64932514 | + | mRNA | protein_coding |
| -483650 | enst00000319580 | sg00000166839 | ankdd1a-201 | 15 | 64911902 | 64958691 | + | mRNA | protein_coding |
| -483650 | enst00000491145 | sg00000166839 | ankdd1a-205 | 15 | 64911902 | 64932756 | + | lnc_RNA | processed_transcript |
| -483650 | enst00000496480 | sg00000166839 | ankdd1a-206 | 15 | 64911902 | 64931967 | + | lnc_RNA | processed_transcript |
Source file: /hps/research1/birney/users/adrien/analyses/cancer_DNA_promethion/run_1_2_3_4/DNA_pipeline_2/results/methylation/pycometh_meth_comp_CGI_3/out.tsv.gz
MD5 hash: 9aa0e3f69cb4e12345c3758eb68a5efc