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CpG interval report generated on 20/05/20 with pycoMeth 0.4.6
Interval details
| pvalue rank | chromosome | start | end | length | number of samples | number of CpGs | pvalue | adjusted pvalue |
|---|---|---|---|---|---|---|---|---|
| #133 | 11 | 118609436 | 118611360 | 1924 | 3 | 68 | 2.67486e-16 | 2.00011e-14 |
Methylation log-likelihood ratio by CpG position
Distribution of CpG methylation log-likelihood ratio by sample
Closest transcripts TSS
| distance to tss | transcript id | gene id | transcript name | chromosome | start | end | strand | feature type | transcript biotype |
|---|---|---|---|---|---|---|---|---|---|
| 0 | enst00000532639 | sg00000019144 | phldb1-221 | 11 | 118610427 | 118627396 | + | mRNA | protein_coding |
| -1793 | enst00000356063 | sg00000019144 | phldb1-201 | 11 | 118607643 | 118658025 | + | mRNA | protein_coding |
| 1793 | enst00000525427 | sg00000019144 | phldb1-206 | 11 | 118613153 | 118615194 | + | lnc_RNA | retained_intron |
| -1803 | enst00000621027 | sg00000019144 | phldb1-228 | 11 | 118607633 | 118632037 | + | lnc_RNA | processed_transcript |
| -1820 | enst00000528594 | sg00000019144 | phldb1-214 | 11 | 118607616 | 118658028 | + | mRNA | nonsense_mediated_decay |
| -1821 | enst00000530994 | sg00000019144 | phldb1-218 | 11 | 118607615 | 118658028 | + | mRNA | nonsense_mediated_decay |
| -1821 | enst00000600882 | sg00000019144 | phldb1-223 | 11 | 118607615 | 118658028 | + | mRNA | protein_coding |
| -1845 | enst00000530708 | sg00000019144 | phldb1-217 | 11 | 118607591 | 118627569 | + | mRNA | protein_coding |
| -2996 | enst00000361417 | sg00000019144 | phldb1-202 | 11 | 118606440 | 118658031 | + | mRNA | protein_coding |
| 4225 | enst00000527259 | sg00000019144 | phldb1-211 | 11 | 118615585 | 118627464 | + | lnc_RNA | processed_transcript |
| 10003 | enst00000526374 | sg00000019144 | phldb1-207 | 11 | 118621363 | 118627593 | + | lnc_RNA | processed_transcript |
| 12724 | enst00000617208 | sg00000019144 | phldb1-226 | 11 | 118624084 | 118625059 | + | lnc_RNA | processed_transcript |
| -15448 | enst00000384456 | sg00000207185 | rnu6-1157p-201 | 11 | 118593988 | 118594093 | + | snRNA | snrna |
| 15570 | enst00000532517 | sg00000019144 | phldb1-220 | 11 | 118626930 | 118658025 | + | lnc_RNA | retained_intron |
| 18619 | enst00000614369 | sg00000019144 | phldb1-225 | 11 | 118629979 | 118658028 | + | lnc_RNA | processed_transcript |
| 20556 | enst00000527898 | sg00000019144 | phldb1-213 | 11 | 118631916 | 118658025 | + | lnc_RNA | processed_transcript |
| 20616 | enst00000534140 | sg00000019144 | phldb1-222 | 11 | 118631976 | 118658025 | + | mRNA | protein_coding |
| 20853 | enst00000612681 | sg00000019144 | phldb1-224 | 11 | 118632213 | 118643940 | + | lnc_RNA | retained_intron |
| 23618 | enst00000526699 | sg00000019144 | phldb1-209 | 11 | 118634978 | 118639355 | + | lnc_RNA | retained_intron |
| 23664 | enst00000527500 | sg00000019144 | phldb1-212 | 11 | 118635024 | 118639237 | + | lnc_RNA | processed_transcript |
| 23669 | enst00000528875 | sg00000019144 | phldb1-215 | 11 | 118635029 | 118650127 | + | lnc_RNA | processed_transcript |
| 25260 | enst00000530198 | sg00000255176 | ap000941.1-201 | 11 | 118636620 | 118638097 | + | lnc_RNA | lncrna |
| 28047 | enst00000392852 | sg00000019144 | phldb1-203 | 11 | 118639407 | 118645783 | + | lnc_RNA | retained_intron |
| 30217 | enst00000524713 | sg00000019144 | phldb1-204 | 11 | 118641577 | 118656841 | + | lnc_RNA | processed_transcript |
| 30679 | enst00000531987 | sg00000019144 | phldb1-219 | 11 | 118642039 | 118644565 | + | lnc_RNA | retained_intron |
| 30991 | enst00000526826 | sg00000019144 | phldb1-210 | 11 | 118642351 | 118644302 | + | lnc_RNA | retained_intron |
| 32640 | enst00000613413 | sg00000284246 | mir6716-201 | 11 | 118644000 | 118644079 | + | miRNA | mirna |
| 32729 | enst00000529005 | sg00000019144 | phldb1-216 | 11 | 118644089 | 118647837 | + | lnc_RNA | processed_transcript |
| 33009 | enst00000525226 | sg00000019144 | phldb1-205 | 11 | 118644369 | 118650521 | + | lnc_RNA | retained_intron |
| 34974 | enst00000526537 | sg00000019144 | phldb1-208 | 11 | 118646334 | 118657152 | + | lnc_RNA | retained_intron |
| -36466 | enst00000528378 | sg00000118096 | ift46-205 | 11 | 118555021 | 118572970 | - | mRNA | protein_coding |
| -36676 | enst00000534114 | sg00000118096 | ift46-211 | 11 | 118555020 | 118572760 | - | mRNA | protein_coding |
| -36733 | enst00000533918 | sg00000118096 | ift46-210 | 11 | 118556906 | 118572703 | - | mRNA | protein_coding |
| -37000 | enst00000534182 | sg00000095139 | arcn1-204 | 11 | 118572436 | 118603033 | + | mRNA | protein_coding |
| -37012 | enst00000359415 | sg00000095139 | arcn1-202 | 11 | 118572424 | 118602928 | + | mRNA | protein_coding |
| -37012 | enst00000614498 | sg00000095139 | arcn1-205 | 11 | 118572424 | 118602927 | + | mRNA | protein_coding |
| -37027 | enst00000264028 | sg00000095139 | arcn1-201 | 11 | 118572409 | 118603033 | + | mRNA | protein_coding |
| -37046 | enst00000392859 | sg00000095139 | arcn1-203 | 11 | 118572390 | 118600993 | + | mRNA | protein_coding |
| 39241 | enst00000620788 | sg00000019144 | phldb1-227 | 11 | 118650601 | 118657490 | + | lnc_RNA | retained_intron |
| -43360 | enst00000264021 | sg00000118096 | ift46-202 | 11 | 118544528 | 118566076 | - | mRNA | protein_coding |
| -43401 | enst00000264020 | sg00000118096 | ift46-201 | 11 | 118544543 | 118566035 | - | mRNA | protein_coding |
| -43425 | enst00000530185 | sg00000118096 | ift46-206 | 11 | 118556994 | 118566011 | - | lnc_RNA | retained_intron |
| -43508 | enst00000527868 | sg00000118096 | ift46-204 | 11 | 118560065 | 118565928 | - | lnc_RNA | processed_transcript |
| -43519 | enst00000530872 | sg00000118096 | ift46-207 | 11 | 118544592 | 118565917 | - | mRNA | protein_coding |
| -43626 | enst00000672656 | sg00000118096 | ift46-213 | 11 | 118544528 | 118565810 | - | mRNA | protein_coding |
| -43790 | enst00000534156 | sg00000118096 | ift46-212 | 11 | 118552235 | 118565646 | - | mRNA | protein_coding |
| -48746 | enst00000465511 | sg00000243431 | rpl5p30-201 | 11 | 118560690 | 118561580 | + | pseudogenic_transcript | processed_pseudogene |
| -49014 | enst00000531939 | sg00000118096 | ift46-209 | 11 | 118552230 | 118560422 | - | mRNA | protein_coding |
| -51780 | enst00000531201 | sg00000118096 | ift46-208 | 11 | 118544901 | 118557656 | - | lnc_RNA | retained_intron |
| -53809 | enst00000525060 | sg00000118096 | ift46-203 | 11 | 118545825 | 118555627 | - | lnc_RNA | retained_intron |
| 68286 | enst00000531295 | sg00000118094 | treh-204 | 11 | 118659809 | 118679646 | - | lnc_RNA | retained_intron |
| 68290 | enst00000613915 | sg00000118094 | treh-205 | 11 | 118658232 | 118679650 | - | mRNA | nonsense_mediated_decay |
| 68290 | enst00000264029 | sg00000118094 | treh-201 | 11 | 118657316 | 118679650 | - | mRNA | protein_coding |
| 68306 | enst00000397925 | sg00000118094 | treh-202 | 11 | 118658269 | 118679666 | - | mRNA | protein_coding |
| 68330 | enst00000527558 | sg00000118094 | treh-203 | 11 | 118662731 | 118679690 | - | lnc_RNA | retained_intron |
| -76404 | enst00000526853 | sg00000149582 | tmem25-212 | 11 | 118533032 | 118534726 | + | mRNA | protein_coding |
| -77863 | enst00000531494 | sg00000149582 | tmem25-222 | 11 | 118531573 | 118533519 | + | lnc_RNA | retained_intron |
| -77910 | enst00000525129 | sg00000149582 | tmem25-210 | 11 | 118531526 | 118531985 | + | lnc_RNA | processed_transcript |
| -77940 | enst00000533689 | sg00000149582 | tmem25-229 | 11 | 118531496 | 118532949 | + | mRNA | protein_coding |
| -77965 | enst00000532749 | sg00000149582 | tmem25-223 | 11 | 118531471 | 118533033 | + | lnc_RNA | processed_transcript |
| -78046 | enst00000524725 | sg00000149582 | tmem25-208 | 11 | 118531390 | 118535829 | + | mRNA | protein_coding |
| -78078 | enst00000527267 | sg00000149582 | tmem25-215 | 11 | 118531358 | 118532296 | + | mRNA | protein_coding |
| -78233 | enst00000528934 | sg00000149582 | tmem25-218 | 11 | 118531203 | 118533477 | + | lnc_RNA | processed_transcript |
| -78233 | enst00000525298 | sg00000149582 | tmem25-211 | 11 | 118531203 | 118532859 | + | lnc_RNA | retained_intron |
| -78234 | enst00000529176 | sg00000149582 | tmem25-220 | 11 | 118531202 | 118532431 | + | lnc_RNA | retained_intron |
| -78234 | enst00000530423 | sg00000149582 | tmem25-221 | 11 | 118531202 | 118532705 | + | lnc_RNA | processed_transcript |
| -78234 | enst00000533137 | sg00000149582 | tmem25-226 | 11 | 118531202 | 118533140 | + | mRNA | protein_coding |
| -78234 | enst00000533587 | sg00000149582 | tmem25-227 | 11 | 118531202 | 118533208 | + | lnc_RNA | processed_transcript |
| -78234 | enst00000529001 | sg00000149582 | tmem25-219 | 11 | 118531202 | 118533622 | + | lnc_RNA | processed_transcript |
| -78234 | enst00000532762 | sg00000149582 | tmem25-224 | 11 | 118531202 | 118534120 | + | mRNA | protein_coding |
| -78234 | enst00000526973 | sg00000149582 | tmem25-214 | 11 | 118531202 | 118534543 | + | mRNA | protein_coding |
| -78234 | enst00000354064 | sg00000149582 | tmem25-202 | 11 | 118531202 | 118535828 | + | mRNA | protein_coding |
| -78234 | enst00000533627 | sg00000149582 | tmem25-228 | 11 | 118531202 | 118535828 | + | lnc_RNA | retained_intron |
| -78234 | enst00000533102 | sg00000149582 | tmem25-225 | 11 | 118531202 | 118535833 | + | mRNA | protein_coding |
| -78234 | enst00000524522 | sg00000149582 | tmem25-207 | 11 | 118531202 | 118535834 | + | lnc_RNA | retained_intron |
| -78237 | enst00000354284 | sg00000149582 | tmem25-203 | 11 | 118531199 | 118546484 | + | mRNA | protein_coding |
| -78244 | enst00000313236 | sg00000149582 | tmem25-201 | 11 | 118531192 | 118535829 | + | mRNA | protein_coding |
| -78244 | enst00000528373 | sg00000149582 | tmem25-217 | 11 | 118531192 | 118533540 | + | mRNA | protein_coding |
| -78244 | enst00000534181 | sg00000149582 | tmem25-230 | 11 | 118531192 | 118533525 | + | mRNA | nonsense_mediated_decay |
| -78244 | enst00000525118 | sg00000149582 | tmem25-209 | 11 | 118531192 | 118533007 | + | mRNA | nonsense_mediated_decay |
| -78244 | enst00000527785 | sg00000149582 | tmem25-216 | 11 | 118531192 | 118532310 | + | lnc_RNA | retained_intron |
| -78261 | enst00000526941 | sg00000149582 | tmem25-213 | 11 | 118531175 | 118532370 | + | lnc_RNA | retained_intron |
| -78342 | enst00000556583 | sg00000255435 | ap001267.3-205 | 11 | 118519616 | 118531094 | - | lnc_RNA | lncrna |
| -78348 | enst00000442938 | sg00000149582 | tmem25-206 | 11 | 118531088 | 118547280 | + | mRNA | protein_coding |
| -78348 | enst00000359862 | sg00000149582 | tmem25-204 | 11 | 118531088 | 118535832 | + | mRNA | protein_coding |
| -78395 | enst00000411589 | sg00000149582 | tmem25-205 | 11 | 118531041 | 118535835 | + | mRNA | protein_coding |
| -78661 | enst00000554407 | sg00000255435 | ap001267.3-203 | 11 | 118519439 | 118530775 | - | lnc_RNA | lncrna |
| -78741 | enst00000532597 | sg00000255435 | ap001267.3-201 | 11 | 118510273 | 118530695 | - | lnc_RNA | lncrna |
| -78866 | enst00000525992 | sg00000255435 | ap001267.3-202 | 11 | 118519385 | 118530570 | - | lnc_RNA | lncrna |
| -78867 | enst00000528578 | sg00000255435 | ap001267.3-204 | 11 | 118519496 | 118530569 | - | lnc_RNA | lncrna |
| 79239 | enst00000531328 | sg00000255239 | trehp1-201 | 11 | 118688033 | 118690599 | - | pseudogenic_transcript | unprocessed_pseudogene |
| -81962 | enst00000302783 | sg00000172425 | ttc36-201 | 11 | 118527474 | 118531197 | + | mRNA | protein_coding |
| -81964 | enst00000533501 | sg00000172425 | ttc36-203 | 11 | 118527472 | 118531197 | + | mRNA | nonsense_mediated_decay |
| -81964 | enst00000528570 | sg00000172425 | ttc36-202 | 11 | 118527472 | 118531197 | + | mRNA | nonsense_mediated_decay |
| 89067 | enst00000646572 | sg00000255422 | ap002954.1-201 | 11 | 118700427 | 118708848 | + | lnc_RNA | lncrna |
| -89879 | enst00000525408 | sg00000118058 | kmt2a-204 | 11 | 118519557 | 118522195 | + | lnc_RNA | retained_intron |
| 90982 | enst00000384731 | sg00000207462 | rnu6-376p-201 | 11 | 118702342 | 118702447 | + | snRNA | snrna |
| 93248 | enst00000526274 | sg00000255422 | ap002954.1-202 | 11 | 118704608 | 118750263 | + | lnc_RNA | lncrna |
| -99888 | enst00000527839 | sg00000118058 | kmt2a-205 | 11 | 118509548 | 118525576 | + | lnc_RNA | retained_intron |
| -100593 | enst00000534678 | sg00000118058 | kmt2a-214 | 11 | 118508843 | 118513214 | + | lnc_RNA | retained_intron |
| -101534 | enst00000648565 | sg00000118058 | kmt2a-218 | 11 | 118507902 | 118522868 | + | lnc_RNA | processed_transcript |
| -102890 | enst00000649878 | sg00000118058 | kmt2a-224 | 11 | 118506546 | 118513876 | + | mRNA | nonsense_mediated_decay |
| -103172 | enst00000647944 | sg00000118058 | kmt2a-216 | 11 | 118506264 | 118510110 | + | mRNA | protein_coding |
| -103822 | enst00000534085 | sg00000118058 | kmt2a-212 | 11 | 118505614 | 118508487 | + | lnc_RNA | retained_intron |
| -114245 | enst00000528278 | sg00000118058 | kmt2a-207 | 11 | 118495191 | 118505185 | + | lnc_RNA | retained_intron |
| 118052 | enst00000664961 | sg00000287238 | ap002954.2-201 | 11 | 118721104 | 118729412 | - | lnc_RNA | lncrna |
| -127013 | enst00000649410 | sg00000118058 | kmt2a-220 | 11 | 118482423 | 118483204 | + | lnc_RNA | processed_transcript |
| -127448 | enst00000392873 | sg00000118058 | kmt2a-202 | 11 | 118481988 | 118484869 | + | lnc_RNA | retained_intron |
| -127448 | enst00000420751 | sg00000118058 | kmt2a-203 | 11 | 118481988 | 118484314 | + | lnc_RNA | processed_transcript |
| -141885 | enst00000648910 | sg00000118058 | kmt2a-219 | 11 | 118467551 | 118471777 | + | lnc_RNA | retained_intron |
| 148009 | enst00000529162 | sg00000110367 | ddx6-203 | 11 | 118751365 | 118759369 | - | lnc_RNA | retained_intron |
| -170402 | enst00000649666 | sg00000118058 | kmt2a-221 | 11 | 118439034 | 118448055 | + | mRNA | protein_coding |
| -172244 | enst00000647638 | sg00000118058 | kmt2a-215 | 11 | 118437192 | 118439173 | + | lnc_RNA | retained_intron |
| -172504 | enst00000648029 | sg00000118058 | kmt2a-217 | 11 | 118436932 | 118469103 | + | lnc_RNA | retained_intron |
| -172509 | enst00000649690 | sg00000118058 | kmt2a-222 | 11 | 118436927 | 118474287 | + | mRNA | protein_coding |
| -172674 | enst00000527869 | sg00000118058 | kmt2a-206 | 11 | 118436762 | 118474307 | + | mRNA | protein_coding |
| -172692 | enst00000532204 | sg00000118058 | kmt2a-210 | 11 | 118436744 | 118449984 | + | mRNA | protein_coding |
| -172692 | enst00000533790 | sg00000118058 | kmt2a-211 | 11 | 118436744 | 118481736 | + | mRNA | protein_coding |
| -172692 | enst00000529852 | sg00000118058 | kmt2a-208 | 11 | 118436744 | 118449995 | + | mRNA | protein_coding |
| -172923 | enst00000649699 | sg00000118058 | kmt2a-223 | 11 | 118436513 | 118522172 | + | mRNA | protein_coding |
| -172926 | enst00000531904 | sg00000118058 | kmt2a-209 | 11 | 118436510 | 118484314 | + | mRNA | protein_coding |
| -172944 | enst00000534358 | sg00000118058 | kmt2a-213 | 11 | 118436492 | 118526832 | + | mRNA | protein_coding |
| -172946 | enst00000389506 | sg00000118058 | kmt2a-201 | 11 | 118436490 | 118523917 | + | mRNA | protein_coding |
| -174230 | enst00000532619 | sg00000255384 | ap001267.2-201 | 11 | 118433121 | 118435206 | - | lnc_RNA | lncrna |
| 178999 | enst00000531971 | sg00000110367 | ddx6-204 | 11 | 118781120 | 118790359 | - | lnc_RNA | retained_intron |
| 179588 | enst00000526070 | sg00000110367 | ddx6-202 | 11 | 118754589 | 118790948 | - | mRNA | protein_coding |
| 179588 | enst00000620157 | sg00000110367 | ddx6-208 | 11 | 118747766 | 118790948 | - | mRNA | protein_coding |
| 179776 | enst00000525082 | sg00000110367 | ddx6-201 | 11 | 118767627 | 118791136 | - | lnc_RNA | retained_intron |
| 179787 | enst00000617381 | sg00000110367 | ddx6-207 | 11 | 118749887 | 118791147 | - | mRNA | protein_coding |
| 179789 | enst00000533239 | sg00000110367 | ddx6-205 | 11 | 118785833 | 118791149 | - | lnc_RNA | retained_intron |
| 179804 | enst00000534980 | sg00000110367 | ddx6-206 | 11 | 118747763 | 118791164 | - | mRNA | protein_coding |
| 179894 | enst00000610705 | sg00000278376 | ap004609.5-201 | 11 | 118791254 | 118793137 | + | lnc_RNA | lncrna |
| -193459 | enst00000602598 | sg00000269944 | ap001267.4-201 | 11 | 118415977 | 118416521 | + | lnc_RNA | lncrna |
| -203309 | enst00000527186 | sg00000167283 | atp5mg-203 | 11 | 118406127 | 118409610 | + | lnc_RNA | retained_intron |
| -207541 | enst00000534438 | sg00000254873 | ap001267.1-202 | 11 | 118398906 | 118401895 | - | lnc_RNA | lncrna |
| -207784 | enst00000534385 | sg00000167283 | atp5mg-208 | 11 | 118401652 | 118407493 | + | lnc_RNA | retained_intron |
| -207803 | enst00000529460 | sg00000167283 | atp5mg-204 | 11 | 118401633 | 118409199 | + | lnc_RNA | processed_transcript |
| -207804 | enst00000524422 | sg00000167283 | atp5mg-202 | 11 | 118401632 | 118431496 | + | mRNA | protein_coding |
| -207814 | enst00000533172 | sg00000167283 | atp5mg-207 | 11 | 118401622 | 118409199 | + | mRNA | protein_coding |
| -207817 | enst00000529770 | sg00000167283 | atp5mg-205 | 11 | 118401619 | 118409199 | + | lnc_RNA | processed_transcript |
| -207826 | enst00000529790 | sg00000167283 | atp5mg-206 | 11 | 118401610 | 118409577 | + | mRNA | nonsense_mediated_decay |
| -207829 | enst00000648261 | sg00000285827 | ap001267.5-202 | 11 | 118401607 | 118482737 | + | mRNA | protein_coding |
| -207830 | enst00000300688 | sg00000167283 | atp5mg-201 | 11 | 118401606 | 118409847 | + | mRNA | protein_coding |
| -207834 | enst00000649464 | sg00000285827 | ap001267.5-201 | 11 | 118401602 | 118449569 | + | mRNA | protein_coding |
| -208127 | enst00000531742 | sg00000254873 | ap001267.1-201 | 11 | 118397095 | 118401309 | - | lnc_RNA | lncrna |
| 210535 | enst00000532177 | sg00000254478 | ap004609.4-201 | 11 | 118821895 | 118822084 | + | pseudogenic_transcript | processed_pseudogene |
| 223196 | enst00000531054 | sg00000254621 | setp16-201 | 11 | 118833846 | 118834556 | - | pseudogenic_transcript | processed_pseudogene |
| 224650 | enst00000364665 | sg00000201535 | ap004609.1-201 | 11 | 118836010 | 118836111 | + | ncRNA | misc_rna |
| -230935 | enst00000545354 | sg00000110344 | ube4a-203 | 11 | 118378501 | 118396507 | + | mRNA | protein_coding |
| -249792 | enst00000431736 | sg00000110344 | ube4a-202 | 11 | 118359644 | 118399207 | + | mRNA | protein_coding |
| -249851 | enst00000252108 | sg00000110344 | ube4a-201 | 11 | 118359585 | 118399211 | + | mRNA | protein_coding |
| -265029 | enst00000532903 | sg00000160654 | cd3g-205 | 11 | 118344407 | 118353247 | + | lnc_RNA | processed_transcript |
| -265050 | enst00000528540 | sg00000160654 | cd3g-204 | 11 | 118344386 | 118349876 | + | mRNA | protein_coding |
| -265071 | enst00000292144 | sg00000160654 | cd3g-201 | 11 | 118344365 | 118353837 | + | mRNA | nonsense_mediated_decay |
| -265092 | enst00000532917 | sg00000160654 | cd3g-206 | 11 | 118344344 | 118355161 | + | mRNA | protein_coding |
| -265092 | enst00000527777 | sg00000160654 | cd3g-203 | 11 | 118344344 | 118350909 | + | lnc_RNA | retained_intron |
| -265092 | enst00000392883 | sg00000160654 | cd3g-202 | 11 | 118344344 | 118353782 | + | mRNA | protein_coding |
| -265092 | enst00000533462 | sg00000160654 | cd3g-207 | 11 | 118344344 | 118350198 | + | lnc_RNA | retained_intron |
| -266692 | enst00000300692 | sg00000167286 | cd3d-201 | 11 | 118338954 | 118342744 | - | mRNA | protein_coding |
| -266789 | enst00000529594 | sg00000167286 | cd3d-204 | 11 | 118339077 | 118342647 | - | mRNA | protein_coding |
| -266805 | enst00000526561 | sg00000167286 | cd3d-203 | 11 | 118339094 | 118342631 | - | lnc_RNA | retained_intron |
| -266805 | enst00000392884 | sg00000167286 | cd3d-202 | 11 | 118339094 | 118342631 | - | mRNA | protein_coding |
| -268499 | enst00000534687 | sg00000167286 | cd3d-205 | 11 | 118339076 | 118340937 | - | mRNA | protein_coding |
| 272532 | enst00000292174 | sg00000160683 | cxcr5-201 | 11 | 118883892 | 118897787 | + | mRNA | protein_coding |
| 276382 | enst00000498872 | sg00000245869 | ap004609.3-201 | 11 | 118885841 | 118887742 | - | lnc_RNA | lncrna |
| -286353 | enst00000525856 | sg00000254992 | ap001582.1-201 | 11 | 118322789 | 118323083 | - | pseudogenic_transcript | processed_pseudogene |
| 297265 | enst00000527266 | sg00000186174 | bcl9l-203 | 11 | 118902774 | 118908625 | - | lnc_RNA | processed_transcript |
| -297292 | enst00000531913 | sg00000198851 | cd3e-206 | 11 | 118312144 | 118315986 | + | lnc_RNA | retained_intron |
| 299348 | enst00000581627 | sg00000264211 | mir4492-201 | 11 | 118910708 | 118910787 | + | miRNA | mirna |
| 299544 | enst00000334801 | sg00000186174 | bcl9l-201 | 11 | 118893875 | 118910904 | - | mRNA | protein_coding |
| 299933 | enst00000530293 | sg00000186174 | bcl9l-204 | 11 | 118899937 | 118911293 | - | lnc_RNA | processed_transcript |
| -304537 | enst00000528600 | sg00000198851 | cd3e-204 | 11 | 118304899 | 118316171 | + | mRNA | protein_coding |
| -304699 | enst00000526146 | sg00000198851 | cd3e-202 | 11 | 118304737 | 118316175 | + | lnc_RNA | retained_intron |
| -304706 | enst00000361763 | sg00000198851 | cd3e-201 | 11 | 118304730 | 118316173 | + | mRNA | protein_coding |
| -304706 | enst00000528435 | sg00000198851 | cd3e-203 | 11 | 118304730 | 118313744 | + | lnc_RNA | retained_intron |
| -304706 | enst00000529713 | sg00000198851 | cd3e-205 | 11 | 118304730 | 118313341 | + | lnc_RNA | retained_intron |
| 313804 | enst00000534788 | sg00000110375 | upk2-202 | 11 | 118925164 | 118958554 | + | lnc_RNA | processed_transcript |
| 314093 | enst00000532899 | sg00000186174 | bcl9l-205 | 11 | 118908417 | 118925453 | - | mRNA | protein_coding |
| 314248 | enst00000526143 | sg00000186174 | bcl9l-202 | 11 | 118897746 | 118925608 | - | mRNA | protein_coding |
| 319856 | enst00000471754 | sg00000239726 | rn7sl688p-201 | 11 | 118931216 | 118931490 | + | ncRNA | misc_rna |
| -344843 | enst00000624982 | sg00000280032 | ap002800.1-201 | 11 | 118264593 | 118266817 | + | unconfirmed_transcript | tec |
| -344900 | enst00000438295 | sg00000149573 | mpzl2-202 | 11 | 118256911 | 118264536 | - | mRNA | protein_coding |
| 344938 | enst00000264031 | sg00000110375 | upk2-201 | 11 | 118956298 | 118958559 | + | mRNA | protein_coding |
| -345050 | enst00000527282 | sg00000149573 | mpzl2-204 | 11 | 118262481 | 118264386 | - | lnc_RNA | retained_intron |
| -345139 | enst00000278937 | sg00000149573 | mpzl2-201 | 11 | 118253416 | 118264297 | - | mRNA | protein_coding |
| -345153 | enst00000529376 | sg00000149573 | mpzl2-206 | 11 | 118259237 | 118264283 | - | lnc_RNA | retained_intron |
| -345163 | enst00000525647 | sg00000149573 | mpzl2-203 | 11 | 118262720 | 118264273 | - | lnc_RNA | processed_transcript |
| -346233 | enst00000534175 | sg00000149573 | mpzl2-207 | 11 | 118254625 | 118263203 | - | lnc_RNA | retained_intron |
| -351776 | enst00000528554 | sg00000149573 | mpzl2-205 | 11 | 118255075 | 118257660 | - | lnc_RNA | retained_intron |
| -357071 | enst00000278949 | sg00000160588 | mpzl3-201 | 11 | 118226690 | 118252365 | - | mRNA | protein_coding |
| -357089 | enst00000525386 | sg00000160588 | mpzl3-203 | 11 | 118229138 | 118252347 | - | mRNA | protein_coding |
| -357089 | enst00000527472 | sg00000160588 | mpzl3-204 | 11 | 118229238 | 118252347 | - | mRNA | protein_coding |
| -357116 | enst00000446386 | sg00000160588 | mpzl3-202 | 11 | 118229454 | 118252320 | - | mRNA | nonsense_mediated_decay |
| 359138 | enst00000410597 | sg00000222529 | ap004609.2-201 | 11 | 118970498 | 118970595 | + | ncRNA | misc_rna |
| 360352 | enst00000531539 | sg00000176302 | foxr1-202 | 11 | 118971712 | 118981264 | + | mRNA | nonsense_mediated_decay |
| 360401 | enst00000317011 | sg00000176302 | foxr1-201 | 11 | 118971761 | 118981287 | + | mRNA | protein_coding |
| 367419 | enst00000533282 | sg00000176302 | foxr1-203 | 11 | 118978779 | 118980572 | + | mRNA | protein_coding |
| 382974 | enst00000629083 | sg00000280502 | ap003392.6-201 | 11 | 118994334 | 118994630 | + | ncRNA | misc_rna |
| 383200 | enst00000628531 | sg00000283691 | ap003392.14-201 | 11 | 118994560 | 118994655 | + | ncRNA | misc_rna |
| -384342 | enst00000640745 | sg00000160593 | jaml-213 | 11 | 118203041 | 118225094 | - | mRNA | protein_coding |
| -384344 | enst00000527877 | sg00000160593 | jaml-207 | 11 | 118205949 | 118225092 | - | mRNA | nonsense_mediated_decay |
| -384415 | enst00000526620 | sg00000160593 | jaml-206 | 11 | 118194165 | 118225021 | - | mRNA | protein_coding |
| -384425 | enst00000529164 | sg00000160593 | jaml-208 | 11 | 118197609 | 118225011 | - | lnc_RNA | retained_intron |
| -384425 | enst00000356289 | sg00000160593 | jaml-202 | 11 | 118193725 | 118225011 | - | mRNA | protein_coding |
| -384442 | enst00000534294 | sg00000160593 | jaml-212 | 11 | 118193965 | 118224994 | - | lnc_RNA | retained_intron |
| 385244 | enst00000582695 | sg00000255121 | ccdc84-dt-202 | 11 | 118994824 | 118996604 | - | lnc_RNA | lncrna |
| -385349 | enst00000525565 | sg00000160593 | jaml-204 | 11 | 118205951 | 118224087 | - | mRNA | protein_coding |
| 386644 | enst00000526453 | sg00000255121 | ccdc84-dt-201 | 11 | 118996195 | 118998004 | - | lnc_RNA | lncrna |
| 386778 | enst00000334418 | sg00000186166 | ccdc84-201 | 11 | 118998138 | 119015793 | + | mRNA | protein_coding |
| 386785 | enst00000524670 | sg00000186166 | ccdc84-202 | 11 | 118998145 | 119012262 | + | lnc_RNA | retained_intron |
| 386795 | enst00000526463 | sg00000186166 | ccdc84-203 | 11 | 118998155 | 119015641 | + | mRNA | nonsense_mediated_decay |
| 386808 | enst00000532132 | sg00000186166 | ccdc84-206 | 11 | 118998168 | 119015641 | + | mRNA | nonsense_mediated_decay |
| 386815 | enst00000534656 | sg00000186166 | ccdc84-208 | 11 | 118998175 | 118999291 | + | lnc_RNA | retained_intron |
| 387681 | enst00000580556 | sg00000186166 | ccdc84-209 | 11 | 118999041 | 119014346 | + | lnc_RNA | processed_transcript |
| 392086 | enst00000469465 | sg00000240970 | rpl23ap64-201 | 11 | 119003012 | 119003446 | - | pseudogenic_transcript | processed_pseudogene |
| 393533 | enst00000531087 | sg00000254428 | ap003392.1-201 | 11 | 119003742 | 119004893 | - | lnc_RNA | lncrna |
| -394545 | enst00000533261 | sg00000160593 | jaml-211 | 11 | 118193994 | 118214891 | - | mRNA | protein_coding |
| 394574 | enst00000527269 | sg00000254909 | ap003392.2-201 | 11 | 119005727 | 119005934 | - | pseudogenic_transcript | processed_pseudogene |
| -396077 | enst00000292067 | sg00000160593 | jaml-201 | 11 | 118193963 | 118213359 | - | mRNA | protein_coding |
| -396080 | enst00000526595 | sg00000160593 | jaml-205 | 11 | 118194004 | 118213356 | - | mRNA | nonsense_mediated_decay |
| -396551 | enst00000524477 | sg00000160593 | jaml-203 | 11 | 118205937 | 118212885 | - | mRNA | protein_coding |
| -396966 | enst00000531536 | sg00000160593 | jaml-210 | 11 | 118205659 | 118212470 | - | lnc_RNA | retained_intron |
| 398174 | enst00000528088 | sg00000186166 | ccdc84-205 | 11 | 119009534 | 119012177 | + | lnc_RNA | retained_intron |
| 399847 | enst00000583842 | sg00000186166 | ccdc84-210 | 11 | 119011207 | 119015092 | + | lnc_RNA | retained_intron |
| -400225 | enst00000517602 | sg00000255163 | hspe1p18-201 | 11 | 118208932 | 118209211 | - | pseudogenic_transcript | processed_pseudogene |
| 400599 | enst00000527356 | sg00000186166 | ccdc84-204 | 11 | 119011959 | 119015791 | + | lnc_RNA | retained_intron |
| 402706 | enst00000533787 | sg00000186166 | ccdc84-207 | 11 | 119014066 | 119015428 | + | lnc_RNA | retained_intron |
| -404046 | enst00000531530 | sg00000160593 | jaml-209 | 11 | 118194077 | 118205390 | - | lnc_RNA | retained_intron |
| 406684 | enst00000528547 | sg00000118181 | rps25-205 | 11 | 119017698 | 119018044 | - | lnc_RNA | processed_transcript |
| 406970 | enst00000532567 | sg00000118181 | rps25-206 | 11 | 119015712 | 119018330 | - | mRNA | nonsense_mediated_decay |
| 406983 | enst00000527673 | sg00000118181 | rps25-202 | 11 | 119015717 | 119018343 | - | mRNA | protein_coding |
| 407306 | enst00000524864 | sg00000118181 | rps25-201 | 11 | 119017361 | 119018666 | - | lnc_RNA | retained_intron |
| 407318 | enst00000527791 | sg00000118181 | rps25-203 | 11 | 119015712 | 119018678 | - | mRNA | nonsense_mediated_decay |
| 407331 | enst00000527853 | sg00000118181 | rps25-204 | 11 | 119015726 | 119018691 | - | lnc_RNA | retained_intron |
| 407403 | enst00000527680 | sg00000196655 | trappc4-208 | 11 | 119018763 | 119019503 | + | lnc_RNA | retained_intron |
| 407406 | enst00000525303 | sg00000196655 | trappc4-206 | 11 | 119018766 | 119023642 | + | mRNA | protein_coding |
| 407406 | enst00000528230 | sg00000196655 | trappc4-209 | 11 | 119018766 | 119023421 | + | mRNA | protein_coding |
| 407406 | enst00000359005 | sg00000196655 | trappc4-201 | 11 | 119018766 | 119023672 | + | mRNA | protein_coding |
| 407406 | enst00000531290 | sg00000196655 | trappc4-210 | 11 | 119018766 | 119023672 | + | lnc_RNA | retained_intron |
| 407406 | enst00000533632 | sg00000196655 | trappc4-214 | 11 | 119018766 | 119024134 | + | mRNA | protein_coding |
| 407406 | enst00000533058 | sg00000196655 | trappc4-212 | 11 | 119018766 | 119025454 | + | mRNA | protein_coding |
| 407406 | enst00000434101 | sg00000196655 | trappc4-202 | 11 | 119018766 | 119023665 | + | mRNA | protein_coding |
| 407406 | enst00000447216 | sg00000196655 | trappc4-203 | 11 | 119018766 | 119020749 | + | lnc_RNA | retained_intron |
| 407430 | enst00000525079 | sg00000196655 | trappc4-205 | 11 | 119018790 | 119023394 | + | mRNA | nonsense_mediated_decay |
| 407435 | enst00000533012 | sg00000196655 | trappc4-211 | 11 | 119018795 | 119023659 | + | mRNA | nonsense_mediated_decay |
| 407584 | enst00000577421 | sg00000283704 | ap003392.15-201 | 11 | 119018944 | 119019012 | + | miRNA | mirna |
| 408032 | enst00000533149 | sg00000196655 | trappc4-213 | 11 | 119019392 | 119023671 | + | lnc_RNA | retained_intron |
| 408957 | enst00000524797 | sg00000196655 | trappc4-204 | 11 | 119020317 | 119023674 | + | lnc_RNA | retained_intron |
| 410408 | enst00000526141 | sg00000196655 | trappc4-207 | 11 | 119021768 | 119023282 | + | lnc_RNA | processed_transcript |
| 417674 | enst00000526275 | sg00000137700 | slc37a4-208 | 11 | 119024356 | 119029034 | - | lnc_RNA | retained_intron |
| 418009 | enst00000525372 | sg00000137700 | slc37a4-206 | 11 | 119024910 | 119029369 | - | lnc_RNA | processed_transcript |
| 418009 | enst00000524428 | sg00000137700 | slc37a4-203 | 11 | 119024910 | 119029369 | - | lnc_RNA | retained_intron |
| 418027 | enst00000529510 | sg00000137700 | slc37a4-211 | 11 | 119025152 | 119029387 | - | lnc_RNA | processed_transcript |
| 418204 | enst00000526626 | sg00000137700 | slc37a4-209 | 11 | 119026954 | 119029564 | - | lnc_RNA | processed_transcript |
| 418204 | enst00000532888 | sg00000137700 | slc37a4-214 | 11 | 119026666 | 119029564 | - | lnc_RNA | retained_intron |
| 418304 | enst00000525787 | sg00000137700 | slc37a4-207 | 11 | 119027812 | 119029664 | - | lnc_RNA | retained_intron |
| 418580 | enst00000534384 | sg00000137700 | slc37a4-215 | 11 | 119028241 | 119029940 | - | lnc_RNA | processed_transcript |
| 418614 | enst00000638186 | sg00000137700 | slc37a4-218 | 11 | 119024430 | 119029974 | - | lnc_RNA | processed_transcript |
| 419019 | enst00000650539 | sg00000137700 | slc37a4-221 | 11 | 119024368 | 119030379 | - | lnc_RNA | processed_transcript |
| 419503 | enst00000532085 | sg00000137700 | slc37a4-213 | 11 | 119024356 | 119030863 | - | lnc_RNA | retained_intron |
| 419512 | enst00000530407 | sg00000137700 | slc37a4-212 | 11 | 119024878 | 119030872 | - | lnc_RNA | processed_transcript |
| 419520 | enst00000527992 | sg00000137700 | slc37a4-210 | 11 | 119024388 | 119030880 | - | lnc_RNA | processed_transcript |
| 419528 | enst00000525039 | sg00000137700 | slc37a4-204 | 11 | 119024910 | 119030888 | - | lnc_RNA | processed_transcript |
| 419529 | enst00000638925 | sg00000137700 | slc37a4-220 | 11 | 119024423 | 119030889 | - | lnc_RNA | processed_transcript |
| 419530 | enst00000638360 | sg00000137700 | slc37a4-219 | 11 | 119024424 | 119030890 | - | lnc_RNA | processed_transcript |
| 419546 | enst00000525102 | sg00000137700 | slc37a4-205 | 11 | 119024114 | 119030906 | - | lnc_RNA | processed_transcript |
| 419546 | enst00000330775 | sg00000137700 | slc37a4-201 | 11 | 119024351 | 119030906 | - | mRNA | protein_coding |
| 419546 | enst00000357590 | sg00000137700 | slc37a4-202 | 11 | 119024351 | 119030906 | - | mRNA | protein_coding |
| 419546 | enst00000538950 | sg00000137700 | slc37a4-216 | 11 | 119024351 | 119030906 | - | mRNA | protein_coding |
| 419546 | enst00000545985 | sg00000137700 | slc37a4-217 | 11 | 119024351 | 119030906 | - | mRNA | protein_coding |
| -432797 | enst00000278947 | sg00000149575 | scn2b-201 | 11 | 118162806 | 118176639 | - | mRNA | protein_coding |
| 432828 | enst00000531886 | sg00000255114 | ap003392.3-201 | 11 | 119044188 | 119045493 | + | lnc_RNA | lncrna |
| -432836 | enst00000658882 | sg00000149575 | scn2b-202 | 11 | 118166601 | 118176600 | - | mRNA | nonsense_mediated_decay |
| 436746 | enst00000527738 | sg00000149428 | hyou1-204 | 11 | 119047170 | 119048106 | - | lnc_RNA | retained_intron |
| 437465 | enst00000531682 | sg00000149428 | hyou1-208 | 11 | 119048357 | 119048825 | - | lnc_RNA | retained_intron |
| -437667 | enst00000669850 | sg00000149575 | scn2b-205 | 11 | 118166539 | 118171769 | - | lnc_RNA | processed_transcript |
| -437777 | enst00000665446 | sg00000149575 | scn2b-204 | 11 | 118168168 | 118171659 | - | lnc_RNA | processed_transcript |
| 444058 | enst00000531694 | sg00000149428 | hyou1-209 | 11 | 119052373 | 119055418 | - | lnc_RNA | retained_intron |
| 445490 | enst00000530473 | sg00000149428 | hyou1-207 | 11 | 119049040 | 119056850 | - | mRNA | protein_coding |
| 445550 | enst00000533381 | sg00000149428 | hyou1-213 | 11 | 119055023 | 119056910 | - | lnc_RNA | retained_intron |
| 445664 | enst00000526656 | sg00000149428 | hyou1-202 | 11 | 119054537 | 119057024 | - | mRNA | protein_coding |
| 445745 | enst00000534233 | sg00000149428 | hyou1-214 | 11 | 119054499 | 119057105 | - | mRNA | protein_coding |
| 445752 | enst00000614711 | sg00000149428 | hyou1-219 | 11 | 119044191 | 119057112 | - | mRNA | protein_coding |
| 445752 | enst00000622474 | sg00000149428 | hyou1-222 | 11 | 119055155 | 119057112 | - | lnc_RNA | retained_intron |
| 445769 | enst00000530467 | sg00000149428 | hyou1-206 | 11 | 119055296 | 119057129 | - | mRNA | protein_coding |
| 445774 | enst00000529174 | sg00000149428 | hyou1-205 | 11 | 119055202 | 119057134 | - | lnc_RNA | retained_intron |
| 445774 | enst00000621959 | sg00000149428 | hyou1-221 | 11 | 119045311 | 119057134 | - | mRNA | protein_coding |
| 445774 | enst00000526354 | sg00000149428 | hyou1-201 | 11 | 119055489 | 119057134 | - | lnc_RNA | retained_intron |
| 445777 | enst00000532421 | sg00000149428 | hyou1-211 | 11 | 119055016 | 119057137 | - | mRNA | protein_coding |
| 445777 | enst00000532519 | sg00000149428 | hyou1-212 | 11 | 119045114 | 119057137 | - | mRNA | protein_coding |
| 445779 | enst00000543287 | sg00000149428 | hyou1-215 | 11 | 119048360 | 119057139 | - | mRNA | nonsense_mediated_decay |
| 445782 | enst00000610597 | sg00000149428 | hyou1-216 | 11 | 119055328 | 119057142 | - | mRNA | protein_coding |
| 445797 | enst00000612687 | sg00000149428 | hyou1-217 | 11 | 119044192 | 119057157 | - | mRNA | protein_coding |
| 445815 | enst00000527038 | sg00000149428 | hyou1-203 | 11 | 119055033 | 119057175 | - | mRNA | protein_coding |
| 445834 | enst00000614668 | sg00000149428 | hyou1-218 | 11 | 119044191 | 119057194 | - | mRNA | protein_coding |
| 445842 | enst00000531968 | sg00000149428 | hyou1-210 | 11 | 119054585 | 119057202 | - | mRNA | nonsense_mediated_decay |
| 445845 | enst00000617285 | sg00000149428 | hyou1-220 | 11 | 119044188 | 119057205 | - | mRNA | protein_coding |
| 445867 | enst00000652093 | sg00000149428 | hyou1-223 | 11 | 119044311 | 119057227 | - | mRNA | protein_coding |
| -446918 | enst00000660924 | sg00000149575 | scn2b-203 | 11 | 118157849 | 118162518 | - | unconfirmed_transcript | tec |
| 454317 | enst00000607857 | sg00000271751 | ap003392.4-201 | 11 | 119065263 | 119065677 | - | lnc_RNA | lncrna |
| 456332 | enst00000621676 | sg00000160695 | vps11-208 | 11 | 119067692 | 119081978 | + | mRNA | protein_coding |
| 456338 | enst00000607709 | sg00000272186 | ap003392.5-201 | 11 | 119067374 | 119067698 | - | lnc_RNA | lncrna |
| 456461 | enst00000614944 | sg00000160695 | vps11-206 | 11 | 119067821 | 119081967 | + | mRNA | protein_coding |
| 456463 | enst00000622309 | sg00000160695 | vps11-209 | 11 | 119067823 | 119081964 | + | lnc_RNA | retained_intron |
| -456548 | enst00000529878 | sg00000177098 | scn4b-204 | 11 | 118136961 | 118152888 | - | mRNA | protein_coding |
| -456616 | enst00000324727 | sg00000177098 | scn4b-201 | 11 | 118133377 | 118152820 | - | mRNA | protein_coding |
| 458173 | enst00000620429 | sg00000160695 | vps11-207 | 11 | 119069533 | 119081964 | + | mRNA | protein_coding |
| 458193 | enst00000529545 | sg00000160695 | vps11-203 | 11 | 119069553 | 119070784 | + | lnc_RNA | retained_intron |
| 460672 | enst00000526829 | sg00000160695 | vps11-202 | 11 | 119072032 | 119076928 | + | lnc_RNA | retained_intron |
| 462462 | enst00000530809 | sg00000160695 | vps11-204 | 11 | 119073822 | 119077647 | + | mRNA | protein_coding |
| -463736 | enst00000532138 | sg00000177098 | scn4b-206 | 11 | 118141206 | 118145700 | - | lnc_RNA | retained_intron |
| -464003 | enst00000415030 | sg00000177098 | scn4b-202 | 11 | 118133377 | 118145433 | - | lnc_RNA | retained_intron |
| 465660 | enst00000534551 | sg00000160695 | vps11-205 | 11 | 119077020 | 119078329 | + | lnc_RNA | processed_transcript |
| -466563 | enst00000423160 | sg00000177098 | scn4b-203 | 11 | 118133379 | 118142873 | - | lnc_RNA | processed_transcript |
| -467572 | enst00000531550 | sg00000177098 | scn4b-205 | 11 | 118136573 | 118141864 | - | lnc_RNA | retained_intron |
| 467822 | enst00000524454 | sg00000160695 | vps11-201 | 11 | 119079182 | 119081965 | + | lnc_RNA | processed_transcript |
| 473506 | enst00000536185 | sg00000256269 | hmbs-206 | 11 | 119084866 | 119089739 | + | lnc_RNA | processed_transcript |
| 473521 | enst00000545901 | sg00000256269 | hmbs-221 | 11 | 119084881 | 119088975 | + | lnc_RNA | retained_intron |
| 473521 | enst00000545621 | sg00000256269 | hmbs-220 | 11 | 119084881 | 119092500 | + | mRNA | nonsense_mediated_decay |
| 473521 | enst00000652429 | sg00000256269 | hmbs-232 | 11 | 119084881 | 119093549 | + | mRNA | protein_coding |
| 473523 | enst00000442944 | sg00000256269 | hmbs-202 | 11 | 119084883 | 119093512 | + | mRNA | protein_coding |
| 473525 | enst00000537841 | sg00000256269 | hmbs-208 | 11 | 119084885 | 119093516 | + | mRNA | protein_coding |
| 473525 | enst00000542729 | sg00000256269 | hmbs-212 | 11 | 119084885 | 119093546 | + | mRNA | protein_coding |
| 473528 | enst00000543821 | sg00000256269 | hmbs-216 | 11 | 119084888 | 119090046 | + | lnc_RNA | retained_intron |
| 473538 | enst00000640813 | sg00000256269 | hmbs-224 | 11 | 119084898 | 119093483 | + | mRNA | nonsense_mediated_decay |
| 473540 | enst00000546302 | sg00000256269 | hmbs-223 | 11 | 119084900 | 119092163 | + | mRNA | protein_coding |
| 473547 | enst00000542822 | sg00000256269 | hmbs-213 | 11 | 119084907 | 119091541 | + | mRNA | nonsense_mediated_decay |
| 473549 | enst00000542044 | sg00000256269 | hmbs-210 | 11 | 119084909 | 119093296 | + | lnc_RNA | retained_intron |
| 473551 | enst00000536813 | sg00000256269 | hmbs-207 | 11 | 119084911 | 119092487 | + | mRNA | protein_coding |
| 473554 | enst00000544387 | sg00000256269 | hmbs-219 | 11 | 119084914 | 119093548 | + | mRNA | protein_coding |
| 473555 | enst00000535793 | sg00000256269 | hmbs-205 | 11 | 119084915 | 119091540 | + | mRNA | nonsense_mediated_decay |
| 473570 | enst00000543090 | sg00000256269 | hmbs-214 | 11 | 119084930 | 119093533 | + | mRNA | protein_coding |
| 473639 | enst00000649868 | sg00000256269 | hmbs-229 | 11 | 119084999 | 119092001 | + | mRNA | nonsense_mediated_decay |
| 473671 | enst00000534956 | sg00000256269 | hmbs-203 | 11 | 119085031 | 119091993 | + | lnc_RNA | processed_transcript |
| 473680 | enst00000648026 | sg00000256269 | hmbs-225 | 11 | 119085040 | 119093483 | + | mRNA | nonsense_mediated_decay |
| 473862 | enst00000650101 | sg00000256269 | hmbs-230 | 11 | 119085222 | 119093512 | + | mRNA | protein_coding |
| 473884 | enst00000650307 | sg00000256269 | hmbs-231 | 11 | 119085244 | 119093501 | + | lnc_RNA | retained_intron |
| 473930 | enst00000649823 | sg00000256269 | hmbs-228 | 11 | 119085290 | 119092950 | + | lnc_RNA | retained_intron |
| 476623 | enst00000535253 | sg00000256269 | hmbs-204 | 11 | 119087983 | 119091526 | + | mRNA | protein_coding |
| 476624 | enst00000542345 | sg00000256269 | hmbs-211 | 11 | 119087984 | 119092256 | + | lnc_RNA | retained_intron |
| 476627 | enst00000648488 | sg00000256269 | hmbs-227 | 11 | 119087987 | 119092163 | + | mRNA | nonsense_mediated_decay |
| 476627 | enst00000546226 | sg00000256269 | hmbs-222 | 11 | 119087987 | 119093547 | + | lnc_RNA | retained_intron |
| 476627 | enst00000392841 | sg00000256269 | hmbs-201 | 11 | 119087987 | 119093549 | + | mRNA | protein_coding |
| 476627 | enst00000543543 | sg00000256269 | hmbs-215 | 11 | 119087987 | 119093518 | + | lnc_RNA | retained_intron |
| 476635 | enst00000648374 | sg00000256269 | hmbs-226 | 11 | 119087995 | 119093547 | + | mRNA | protein_coding |
| 476894 | enst00000544360 | sg00000256269 | hmbs-218 | 11 | 119088254 | 119091641 | + | lnc_RNA | retained_intron |
| 480178 | enst00000544182 | sg00000256269 | hmbs-217 | 11 | 119091538 | 119093290 | + | lnc_RNA | retained_intron |
| 481251 | enst00000539045 | sg00000256269 | hmbs-209 | 11 | 119092611 | 119093543 | + | lnc_RNA | retained_intron |
| 484089 | enst00000375167 | sg00000188486 | h2ax-201 | 11 | 119093879 | 119095449 | - | mRNA | nonsense_mediated_decay |
| 484107 | enst00000530167 | sg00000188486 | h2ax-202 | 11 | 119093854 | 119095467 | - | mRNA | protein_coding |
| 487075 | enst00000524658 | sg00000172269 | dpagt1-211 | 11 | 119097337 | 119098435 | - | lnc_RNA | retained_intron |
| 489048 | enst00000638850 | sg00000172269 | dpagt1-216 | 11 | 119096596 | 119100408 | - | mRNA | nonsense_mediated_decay |
| 489048 | enst00000636404 | sg00000172269 | dpagt1-215 | 11 | 119096596 | 119100408 | - | mRNA | protein_coding |
| 489049 | enst00000461999 | sg00000172269 | dpagt1-208 | 11 | 119096511 | 119100409 | - | lnc_RNA | retained_intron |
| 489556 | enst00000533687 | sg00000172269 | dpagt1-214 | 11 | 119098074 | 119100916 | - | lnc_RNA | retained_intron |
| 489663 | enst00000530052 | sg00000172269 | dpagt1-213 | 11 | 119097960 | 119101023 | - | lnc_RNA | retained_intron |
| 489768 | enst00000525456 | sg00000172269 | dpagt1-212 | 11 | 119097263 | 119101128 | - | lnc_RNA | retained_intron |
| 490464 | enst00000640102 | sg00000172269 | dpagt1-218 | 11 | 119097140 | 119101824 | - | mRNA | nonsense_mediated_decay |
| 490472 | enst00000445653 | sg00000172269 | dpagt1-206 | 11 | 119100629 | 119101832 | - | lnc_RNA | processed_transcript |
| 490477 | enst00000639704 | sg00000172269 | dpagt1-217 | 11 | 119096595 | 119101837 | - | mRNA | protein_coding |
| 490493 | enst00000472016 | sg00000172269 | dpagt1-209 | 11 | 119100930 | 119101853 | - | lnc_RNA | retained_intron |
| 490493 | enst00000354202 | sg00000172269 | dpagt1-201 | 11 | 119096510 | 119101853 | - | mRNA | protein_coding |
| 490496 | enst00000640747 | sg00000172269 | dpagt1-219 | 11 | 119096597 | 119101856 | - | mRNA | nonsense_mediated_decay |
| 490500 | enst00000460183 | sg00000172269 | dpagt1-207 | 11 | 119100629 | 119101860 | - | lnc_RNA | retained_intron |
| 490500 | enst00000414373 | sg00000172269 | dpagt1-204 | 11 | 119096549 | 119101860 | - | mRNA | nonsense_mediated_decay |
| 490518 | enst00000392834 | sg00000172269 | dpagt1-202 | 11 | 119096510 | 119101878 | - | mRNA | nonsense_mediated_decay |
| 490782 | enst00000481084 | sg00000172269 | dpagt1-210 | 11 | 119096511 | 119102142 | - | lnc_RNA | retained_intron |
| 490838 | enst00000534024 | sg00000172375 | c2cd2l-210 | 11 | 119102198 | 119107696 | + | lnc_RNA | processed_transcript |
| 491011 | enst00000442480 | sg00000172269 | dpagt1-205 | 11 | 119096958 | 119102371 | - | mRNA | nonsense_mediated_decay |
| -494565 | enst00000523770 | sg00000137648 | tmprss4-215 | 11 | 118114871 | 118115560 | + | lnc_RNA | retained_intron |
| 495355 | enst00000528271 | sg00000172375 | c2cd2l-204 | 11 | 119106715 | 119107546 | + | lnc_RNA | processed_transcript |
| 495382 | enst00000529600 | sg00000172375 | c2cd2l-206 | 11 | 119106742 | 119107576 | + | lnc_RNA | processed_transcript |
| 495390 | enst00000529885 | sg00000172375 | c2cd2l-208 | 11 | 119106750 | 119107696 | + | lnc_RNA | processed_transcript |
| 495582 | enst00000527854 | sg00000172375 | c2cd2l-203 | 11 | 119106942 | 119107758 | + | lnc_RNA | processed_transcript |
| 496023 | enst00000336702 | sg00000172375 | c2cd2l-201 | 11 | 119107383 | 119118544 | + | mRNA | protein_coding |
| 496124 | enst00000648610 | sg00000172375 | c2cd2l-211 | 11 | 119107484 | 119117121 | + | mRNA | protein_coding |
| -496144 | enst00000524218 | sg00000137648 | tmprss4-216 | 11 | 118113292 | 118118450 | + | mRNA | protein_coding |
| -496160 | enst00000518610 | sg00000137648 | tmprss4-205 | 11 | 118113276 | 118115047 | + | lnc_RNA | retained_intron |
| 496971 | enst00000409993 | sg00000172269 | dpagt1-203 | 11 | 119096503 | 119108331 | - | mRNA | protein_coding |
| -497565 | enst00000518413 | sg00000137648 | tmprss4-204 | 11 | 118111871 | 118118155 | + | lnc_RNA | processed_transcript |
| 498743 | enst00000529874 | sg00000172375 | c2cd2l-207 | 11 | 119110103 | 119114134 | + | lnc_RNA | retained_intron |
| 499227 | enst00000525598 | sg00000172375 | c2cd2l-202 | 11 | 119110587 | 119117121 | + | lnc_RNA | retained_intron |
| 499697 | enst00000528586 | sg00000172375 | c2cd2l-205 | 11 | 119111057 | 119117121 | + | mRNA | protein_coding |
Source file: /hps/research1/birney/users/adrien/analyses/cancer_DNA_promethion/run_1_2_3_4/DNA_pipeline_2/results/methylation/pycometh_meth_comp_CGI_3/out.tsv.gz
MD5 hash: 9aa0e3f69cb4e12345c3758eb68a5efc