pvalue rank | chromosome | start | end | length | number of samples | number of CpGs | pvalue | adjusted pvalue |
---|---|---|---|---|---|---|---|---|
#140 | 19 | 49337904 | 49339149 | 1245 | 3 | 36 | 4.88975e-16 | 3.45527e-14 |
distance to tss | transcript id | gene id | transcript name | chromosome | start | end | strand | feature type | transcript biotype |
---|---|---|---|---|---|---|---|---|---|
-689 | enst00000594743 | sg00000104894 | cd37-206 | 19 | 49337215 | 49340027 | + | mRNA | protein_coding |
1133 | enst00000602554 | sg00000197813 | ac011450.1-201 | 19 | 49331617 | 49340282 | - | lnc_RNA | lncrna |
1154 | enst00000358234 | sg00000197813 | ac011450.1-202 | 19 | 49331525 | 49340303 | - | lnc_RNA | lncrna |
1446 | enst00000600121 | sg00000104894 | cd37-215 | 19 | 49340595 | 49343335 | + | lnc_RNA | processed_transcript |
-2440 | enst00000595660 | sg00000104894 | cd37-207 | 19 | 49335464 | 49337217 | + | mRNA | protein_coding |
-2447 | enst00000597602 | sg00000104894 | cd37-211 | 19 | 49335457 | 49337163 | + | mRNA | protein_coding |
-2458 | enst00000598134 | sg00000104894 | cd37-214 | 19 | 49335446 | 49337246 | + | lnc_RNA | retained_intron |
-2470 | enst00000596426 | sg00000104894 | cd37-209 | 19 | 49335434 | 49338201 | + | lnc_RNA | processed_transcript |
-2477 | enst00000535669 | sg00000104894 | cd37-204 | 19 | 49335427 | 49340205 | + | mRNA | protein_coding |
-2486 | enst00000597852 | sg00000104894 | cd37-212 | 19 | 49335418 | 49340606 | + | lnc_RNA | retained_intron |
-2498 | enst00000593512 | sg00000104894 | cd37-205 | 19 | 49335406 | 49337961 | + | lnc_RNA | retained_intron |
-2498 | enst00000323906 | sg00000104894 | cd37-201 | 19 | 49335406 | 49340606 | + | mRNA | protein_coding |
-2504 | enst00000595725 | sg00000104894 | cd37-208 | 19 | 49335400 | 49340466 | + | mRNA | nonsense_mediated_decay |
-2508 | enst00000598095 | sg00000104894 | cd37-213 | 19 | 49335396 | 49340132 | + | mRNA | protein_coding |
-2508 | enst00000426897 | sg00000104894 | cd37-203 | 19 | 49335396 | 49340575 | + | mRNA | protein_coding |
-2699 | enst00000597033 | sg00000104894 | cd37-210 | 19 | 49335205 | 49337682 | + | lnc_RNA | processed_transcript |
-2733 | enst00000391859 | sg00000104894 | cd37-202 | 19 | 49335171 | 49340602 | + | mRNA | nonsense_mediated_decay |
-12689 | enst00000598828 | sg00000063127 | slc6a16-207 | 19 | 49290691 | 49325215 | - | mRNA | protein_coding |
-12713 | enst00000335875 | sg00000063127 | slc6a16-201 | 19 | 49289638 | 49325191 | - | mRNA | protein_coding |
-12719 | enst00000454748 | sg00000063127 | slc6a16-202 | 19 | 49289765 | 49325185 | - | mRNA | protein_coding |
-12772 | enst00000598221 | sg00000063127 | slc6a16-206 | 19 | 49293150 | 49325132 | - | lnc_RNA | retained_intron |
17003 | enst00000596488 | sg00000268157 | ac010524.1-201 | 19 | 49356152 | 49357769 | + | lnc_RNA | lncrna |
18106 | enst00000598823 | sg00000074219 | tead2-209 | 19 | 49347224 | 49357255 | - | mRNA | nonsense_mediated_decay |
18107 | enst00000598397 | sg00000074219 | tead2-207 | 19 | 49347233 | 49357256 | - | lnc_RNA | processed_transcript |
20708 | enst00000595233 | sg00000074219 | tead2-205 | 19 | 49359305 | 49359857 | - | lnc_RNA | retained_intron |
21289 | enst00000377214 | sg00000074219 | tead2-202 | 19 | 49340600 | 49360438 | - | mRNA | protein_coding |
22346 | enst00000598810 | sg00000074219 | tead2-208 | 19 | 49340595 | 49361495 | - | mRNA | protein_coding |
22634 | enst00000594268 | sg00000104901 | dkkl1-202 | 19 | 49361783 | 49375116 | + | mRNA | protein_coding |
23233 | enst00000593945 | sg00000074219 | tead2-204 | 19 | 49340595 | 49362382 | - | mRNA | protein_coding |
23258 | enst00000601519 | sg00000074219 | tead2-210 | 19 | 49340595 | 49362407 | - | mRNA | protein_coding |
23292 | enst00000539846 | sg00000074219 | tead2-203 | 19 | 49341082 | 49362441 | - | mRNA | protein_coding |
23292 | enst00000596757 | sg00000074219 | tead2-206 | 19 | 49347357 | 49362441 | - | mRNA | protein_coding |
23308 | enst00000311227 | sg00000074219 | tead2-201 | 19 | 49340595 | 49362457 | - | mRNA | protein_coding |
23925 | enst00000597873 | sg00000104901 | dkkl1-205 | 19 | 49363074 | 49374961 | + | mRNA | protein_coding |
24581 | enst00000596402 | sg00000104901 | dkkl1-203 | 19 | 49363730 | 49374899 | + | mRNA | protein_coding |
24728 | enst00000221498 | sg00000104901 | dkkl1-201 | 19 | 49363877 | 49375116 | + | mRNA | protein_coding |
24785 | enst00000597546 | sg00000104901 | dkkl1-204 | 19 | 49363934 | 49374991 | + | mRNA | protein_coding |
25506 | enst00000598682 | sg00000104901 | dkkl1-206 | 19 | 49364655 | 49375116 | + | mRNA | protein_coding |
-27493 | enst00000594917 | sg00000063127 | slc6a16-204 | 19 | 49306085 | 49310411 | - | mRNA | protein_coding |
-27758 | enst00000597969 | sg00000063127 | slc6a16-205 | 19 | 49305885 | 49310146 | - | mRNA | protein_coding |
-28952 | enst00000594180 | sg00000063127 | slc6a16-203 | 19 | 49305757 | 49308952 | - | mRNA | protein_coding |
-29036 | enst00000584846 | sg00000265407 | mir4324-201 | 19 | 49308797 | 49308868 | - | miRNA | mirna |
48932 | enst00000599433 | sg00000268686 | ac010643.1-201 | 19 | 49368705 | 49388081 | - | lnc_RNA | lncrna |
48936 | enst00000660123 | sg00000268686 | ac010643.1-203 | 19 | 49368558 | 49388085 | - | lnc_RNA | lncrna |
48942 | enst00000657688 | sg00000268686 | ac010643.1-202 | 19 | 49375728 | 49388091 | - | lnc_RNA | lncrna |
49070 | enst00000600895 | sg00000161609 | ccdc155-215 | 19 | 49388219 | 49394896 | + | lnc_RNA | retained_intron |
49100 | enst00000447857 | sg00000161609 | ccdc155-201 | 19 | 49388249 | 49417990 | + | mRNA | protein_coding |
49134 | enst00000596771 | sg00000161609 | ccdc155-210 | 19 | 49388283 | 49399805 | + | lnc_RNA | retained_intron |
49134 | enst00000598730 | sg00000161609 | ccdc155-213 | 19 | 49388283 | 49395789 | + | mRNA | protein_coding |
49138 | enst00000596862 | sg00000161609 | ccdc155-211 | 19 | 49388287 | 49394866 | + | lnc_RNA | retained_intron |
49148 | enst00000597993 | sg00000161609 | ccdc155-212 | 19 | 49388297 | 49395134 | + | mRNA | nonsense_mediated_decay |
49151 | enst00000593725 | sg00000161609 | ccdc155-204 | 19 | 49388300 | 49393743 | + | lnc_RNA | processed_transcript |
49152 | enst00000594905 | sg00000161609 | ccdc155-206 | 19 | 49388301 | 49395265 | + | mRNA | protein_coding |
49168 | enst00000595828 | sg00000161609 | ccdc155-207 | 19 | 49388317 | 49398121 | + | mRNA | protein_coding |
49231 | enst00000594043 | sg00000161609 | ccdc155-205 | 19 | 49388380 | 49398093 | + | mRNA | protein_coding |
55394 | enst00000600570 | sg00000161609 | ccdc155-214 | 19 | 49394543 | 49417989 | + | mRNA | protein_coding |
56543 | enst00000596130 | sg00000161609 | ccdc155-208 | 19 | 49395692 | 49409031 | + | lnc_RNA | retained_intron |
58783 | enst00000593631 | sg00000161609 | ccdc155-203 | 19 | 49397932 | 49399470 | + | lnc_RNA | retained_intron |
-62785 | enst00000429430 | sg00000235555 | sumo1p4-201 | 19 | 49275119 | 49275420 | + | pseudogenic_transcript | processed_pseudogene |
68488 | enst00000593362 | sg00000161609 | ccdc155-202 | 19 | 49407637 | 49415619 | + | lnc_RNA | retained_intron |
69124 | enst00000596419 | sg00000161609 | ccdc155-209 | 19 | 49408273 | 49409862 | + | lnc_RNA | retained_intron |
-81802 | enst00000599458 | sg00000269009 | slc6a21p-201 | 19 | 49255472 | 49256102 | - | pseudogenic_transcript | processed_pseudogene |
84292 | enst00000270631 | sg00000142538 | pth2-201 | 19 | 49422419 | 49423441 | - | mRNA | protein_coding |
84600 | enst00000576655 | sg00000261949 | gfy-201 | 19 | 49423749 | 49428818 | + | mRNA | protein_coding |
87282 | enst00000610896 | sg00000261949 | gfy-202 | 19 | 49426431 | 49428818 | + | mRNA | protein_coding |
95512 | enst00000596689 | sg00000104888 | slc17a7-202 | 19 | 49432622 | 49434661 | - | mRNA | nonsense_mediated_decay |
97031 | enst00000600672 | sg00000104888 | slc17a7-205 | 19 | 49430755 | 49436180 | - | lnc_RNA | retained_intron |
99165 | enst00000598018 | sg00000104888 | slc17a7-203 | 19 | 49433259 | 49438314 | - | lnc_RNA | retained_intron |
102378 | enst00000221485 | sg00000104888 | slc17a7-201 | 19 | 49429401 | 49441527 | - | mRNA | protein_coding |
103211 | enst00000600601 | sg00000104888 | slc17a7-204 | 19 | 49429986 | 49442360 | - | mRNA | protein_coding |
107750 | enst00000602076 | sg00000104872 | pih1d1-223 | 19 | 49446299 | 49446899 | - | lnc_RNA | retained_intron |
107896 | enst00000602226 | sg00000104872 | pih1d1-224 | 19 | 49446299 | 49447045 | - | lnc_RNA | processed_transcript |
108028 | enst00000595633 | sg00000104872 | pih1d1-208 | 19 | 49446298 | 49447177 | - | lnc_RNA | retained_intron |
108861 | enst00000598175 | sg00000104872 | pih1d1-215 | 19 | 49446299 | 49448010 | - | mRNA | nonsense_mediated_decay |
108861 | enst00000596895 | sg00000104872 | pih1d1-211 | 19 | 49447214 | 49448010 | - | lnc_RNA | retained_intron |
108892 | enst00000597577 | sg00000104872 | pih1d1-214 | 19 | 49446299 | 49448041 | - | mRNA | nonsense_mediated_decay |
108913 | enst00000594845 | sg00000104872 | pih1d1-204 | 19 | 49446299 | 49448062 | - | mRNA | nonsense_mediated_decay |
109425 | enst00000593629 | sg00000104872 | pih1d1-202 | 19 | 49446299 | 49448574 | - | lnc_RNA | retained_intron |
110371 | enst00000598889 | sg00000104872 | pih1d1-216 | 19 | 49446299 | 49449520 | - | mRNA | nonsense_mediated_decay |
110438 | enst00000600875 | sg00000104872 | pih1d1-219 | 19 | 49446299 | 49449587 | - | mRNA | protein_coding |
110494 | enst00000596651 | sg00000104872 | pih1d1-210 | 19 | 49446299 | 49449643 | - | mRNA | nonsense_mediated_decay |
111687 | enst00000596916 | sg00000104872 | pih1d1-212 | 19 | 49446298 | 49450836 | - | mRNA | nonsense_mediated_decay |
112381 | enst00000601053 | sg00000104872 | pih1d1-220 | 19 | 49446742 | 49451530 | - | mRNA | nonsense_mediated_decay |
112452 | enst00000601807 | sg00000104872 | pih1d1-221 | 19 | 49446401 | 49451601 | - | mRNA | protein_coding |
112599 | enst00000599791 | sg00000104872 | pih1d1-218 | 19 | 49449111 | 49451748 | - | lnc_RNA | retained_intron |
112642 | enst00000595074 | sg00000104872 | pih1d1-205 | 19 | 49448992 | 49451791 | - | lnc_RNA | retained_intron |
112651 | enst00000595516 | sg00000104872 | pih1d1-206 | 19 | 49447287 | 49451800 | - | lnc_RNA | retained_intron |
112665 | enst00000262265 | sg00000104872 | pih1d1-201 | 19 | 49446298 | 49451814 | - | mRNA | protein_coding |
112668 | enst00000593900 | sg00000104872 | pih1d1-203 | 19 | 49447710 | 49451817 | - | lnc_RNA | retained_intron |
112752 | enst00000595550 | sg00000104872 | pih1d1-207 | 19 | 49450891 | 49451901 | - | mRNA | protein_coding |
114076 | enst00000540132 | sg00000161618 | aldh16a1-203 | 19 | 49453225 | 49470534 | + | mRNA | protein_coding |
114076 | enst00000293350 | sg00000161618 | aldh16a1-201 | 19 | 49453225 | 49471050 | + | mRNA | protein_coding |
114077 | enst00000599652 | sg00000161618 | aldh16a1-207 | 19 | 49453226 | 49470588 | + | lnc_RNA | retained_intron |
114087 | enst00000455361 | sg00000161618 | aldh16a1-202 | 19 | 49453236 | 49470585 | + | mRNA | protein_coding |
114139 | enst00000593417 | sg00000161618 | aldh16a1-204 | 19 | 49453288 | 49470587 | + | mRNA | nonsense_mediated_decay |
114150 | enst00000598015 | sg00000161618 | aldh16a1-206 | 19 | 49453299 | 49459730 | + | lnc_RNA | processed_transcript |
114344 | enst00000601825 | sg00000104872 | pih1d1-222 | 19 | 49449566 | 49453493 | - | mRNA | protein_coding |
114345 | enst00000596049 | sg00000104872 | pih1d1-209 | 19 | 49446369 | 49453494 | - | mRNA | protein_coding |
114346 | enst00000599366 | sg00000104872 | pih1d1-217 | 19 | 49447375 | 49453495 | - | mRNA | protein_coding |
114348 | enst00000597415 | sg00000104872 | pih1d1-213 | 19 | 49447424 | 49453497 | - | mRNA | protein_coding |
123603 | enst00000599536 | sg00000269469 | ac010619.2-201 | 19 | 49462752 | 49486231 | + | mRNA | nonsense_mediated_decay |
125290 | enst00000600265 | sg00000161618 | aldh16a1-208 | 19 | 49464439 | 49468945 | + | mRNA | nonsense_mediated_decay |
-127170 | enst00000597316 | sg00000130529 | trpm4-208 | 19 | 49210734 | 49211834 | + | mRNA | protein_coding |
-127303 | enst00000599459 | sg00000130529 | trpm4-212 | 19 | 49210601 | 49211400 | + | lnc_RNA | retained_intron |
129144 | enst00000594549 | sg00000161618 | aldh16a1-205 | 19 | 49468293 | 49470589 | + | lnc_RNA | retained_intron |
135058 | enst00000601800 | sg00000090554 | flt3lg-212 | 19 | 49474207 | 49486231 | + | mRNA | nonsense_mediated_decay |
135066 | enst00000597551 | sg00000090554 | flt3lg-206 | 19 | 49474215 | 49486231 | + | mRNA | protein_coding |
135079 | enst00000596435 | sg00000090554 | flt3lg-205 | 19 | 49474228 | 49486231 | + | mRNA | protein_coding |
135087 | enst00000204637 | sg00000090554 | flt3lg-201 | 19 | 49474236 | 49486231 | + | mRNA | protein_coding |
135087 | enst00000600084 | sg00000090554 | flt3lg-210 | 19 | 49474236 | 49486231 | + | mRNA | nonsense_mediated_decay |
135103 | enst00000600429 | sg00000090554 | flt3lg-211 | 19 | 49474252 | 49486151 | + | mRNA | protein_coding |
135412 | enst00000594009 | sg00000090554 | flt3lg-203 | 19 | 49474561 | 49486231 | + | mRNA | protein_coding |
135434 | enst00000593422 | sg00000090554 | flt3lg-202 | 19 | 49474583 | 49476730 | + | lnc_RNA | retained_intron |
135437 | enst00000595815 | sg00000273189 | ac010619.3-201 | 19 | 49474586 | 49487637 | + | lnc_RNA | lncrna |
135453 | enst00000595510 | sg00000090554 | flt3lg-204 | 19 | 49474602 | 49482391 | + | mRNA | protein_coding |
136631 | enst00000598555 | sg00000090554 | flt3lg-209 | 19 | 49475780 | 49486231 | + | mRNA | protein_coding |
136960 | enst00000598472 | sg00000090554 | flt3lg-208 | 19 | 49476109 | 49486029 | + | lnc_RNA | retained_intron |
139768 | enst00000597914 | sg00000090554 | flt3lg-207 | 19 | 49478917 | 49481581 | + | mRNA | protein_coding |
148405 | enst00000621674 | sg00000142541 | rpl13a-213 | 19 | 49487554 | 49492301 | + | mRNA | protein_coding |
148454 | enst00000624069 | sg00000142541 | rpl13a-214 | 19 | 49487603 | 49492308 | + | mRNA | nonsense_mediated_decay |
148459 | enst00000484279 | sg00000142541 | rpl13a-210 | 19 | 49487608 | 49491807 | + | mRNA | nonsense_mediated_decay |
148459 | enst00000488946 | sg00000142541 | rpl13a-212 | 19 | 49487608 | 49492305 | + | lnc_RNA | retained_intron |
148459 | enst00000391857 | sg00000142541 | rpl13a-201 | 19 | 49487608 | 49492308 | + | mRNA | protein_coding |
148459 | enst00000472481 | sg00000142541 | rpl13a-204 | 19 | 49487608 | 49491228 | + | lnc_RNA | retained_intron |
148466 | enst00000479992 | sg00000142541 | rpl13a-209 | 19 | 49487615 | 49491861 | + | lnc_RNA | retained_intron |
148467 | enst00000486930 | sg00000142541 | rpl13a-211 | 19 | 49487616 | 49490851 | + | lnc_RNA | retained_intron |
148476 | enst00000477613 | sg00000142541 | rpl13a-208 | 19 | 49487625 | 49491889 | + | lnc_RNA | processed_transcript |
148485 | enst00000467825 | sg00000142541 | rpl13a-202 | 19 | 49487634 | 49491843 | + | mRNA | protein_coding |
-149036 | enst00000595882 | sg00000130529 | trpm4-206 | 19 | 49188868 | 49196716 | + | lnc_RNA | retained_intron |
150701 | enst00000476268 | sg00000142541 | rpl13a-206 | 19 | 49489850 | 49491811 | + | lnc_RNA | retained_intron |
150816 | enst00000364805 | sg00000201675 | snord32a-201 | 19 | 49489965 | 49490048 | + | snoRNA | snorna |
151380 | enst00000474171 | sg00000142541 | rpl13a-205 | 19 | 49490529 | 49491757 | + | lnc_RNA | retained_intron |
151466 | enst00000362761 | sg00000199631 | snord33-201 | 19 | 49490615 | 49490699 | + | snoRNA | snorna |
151496 | enst00000468655 | sg00000142541 | rpl13a-203 | 19 | 49490645 | 49491226 | + | lnc_RNA | retained_intron |
151691 | enst00000476300 | sg00000142541 | rpl13a-207 | 19 | 49490840 | 49491814 | + | lnc_RNA | retained_intron |
151755 | enst00000365633 | sg00000202503 | snord34-201 | 19 | 49490904 | 49490974 | + | snoRNA | snorna |
152026 | enst00000363389 | sg00000200259 | snord35a-201 | 19 | 49491175 | 49491260 | + | snoRNA | snorna |
-155378 | enst00000595071 | sg00000130529 | trpm4-204 | 19 | 49182526 | 49211836 | + | lnc_RNA | retained_intron |
157216 | enst00000600027 | sg00000142534 | rps11-206 | 19 | 49496365 | 49499689 | + | lnc_RNA | retained_intron |
157221 | enst00000599167 | sg00000142534 | rps11-204 | 19 | 49496370 | 49499689 | + | lnc_RNA | retained_intron |
157282 | enst00000602252 | sg00000142534 | rps11-209 | 19 | 49496431 | 49499689 | + | lnc_RNA | retained_intron |
157283 | enst00000596873 | sg00000142534 | rps11-203 | 19 | 49496432 | 49498251 | + | mRNA | protein_coding |
157285 | enst00000270625 | sg00000142534 | rps11-201 | 19 | 49496434 | 49499708 | + | mRNA | protein_coding |
157285 | enst00000594493 | sg00000142534 | rps11-202 | 19 | 49496434 | 49499689 | + | mRNA | protein_coding |
157287 | enst00000601216 | sg00000142534 | rps11-207 | 19 | 49496436 | 49498080 | + | lnc_RNA | retained_intron |
157305 | enst00000599561 | sg00000142534 | rps11-205 | 19 | 49496454 | 49499689 | + | mRNA | protein_coding |
157317 | enst00000601306 | sg00000142534 | rps11-208 | 19 | 49496466 | 49499688 | + | mRNA | nonsense_mediated_decay |
158571 | enst00000363660 | sg00000200530 | snord35b-201 | 19 | 49497720 | 49497806 | + | snoRNA | snorna |
161719 | enst00000385048 | sg00000207782 | mir150-201 | 19 | 49500785 | 49500868 | - | miRNA | mirna |
163490 | enst00000597056 | sg00000268681 | cox6cp7-201 | 19 | 49502432 | 49502639 | - | pseudogenic_transcript | processed_pseudogene |
167667 | enst00000596147 | sg00000104870 | fcgrt-209 | 19 | 49506816 | 49524780 | + | lnc_RNA | retained_intron |
-169277 | enst00000601347 | sg00000130529 | trpm4-214 | 19 | 49168627 | 49182755 | + | lnc_RNA | processed_transcript |
-170260 | enst00000594568 | sg00000130529 | trpm4-203 | 19 | 49167644 | 49168337 | + | lnc_RNA | retained_intron |
173226 | enst00000598491 | sg00000104870 | fcgrt-213 | 19 | 49512375 | 49514309 | + | mRNA | protein_coding |
173486 | enst00000599701 | sg00000104870 | fcgrt-216 | 19 | 49512635 | 49514421 | + | mRNA | protein_coding |
173512 | enst00000221466 | sg00000104870 | fcgrt-201 | 19 | 49512661 | 49526428 | + | mRNA | protein_coding |
173513 | enst00000598927 | sg00000104870 | fcgrt-214 | 19 | 49512662 | 49526297 | + | mRNA | nonsense_mediated_decay |
174005 | enst00000426395 | sg00000104870 | fcgrt-202 | 19 | 49513154 | 49526333 | + | mRNA | protein_coding |
174028 | enst00000595677 | sg00000104870 | fcgrt-207 | 19 | 49513177 | 49521813 | + | lnc_RNA | processed_transcript |
174030 | enst00000600273 | sg00000104870 | fcgrt-218 | 19 | 49513179 | 49514388 | + | mRNA | protein_coding |
174046 | enst00000595881 | sg00000104870 | fcgrt-208 | 19 | 49513195 | 49526331 | + | lnc_RNA | retained_intron |
174048 | enst00000594823 | sg00000104870 | fcgrt-206 | 19 | 49513197 | 49524664 | + | lnc_RNA | processed_transcript |
174106 | enst00000599988 | sg00000104870 | fcgrt-217 | 19 | 49513255 | 49526333 | + | mRNA | protein_coding |
174230 | enst00000596975 | sg00000104870 | fcgrt-210 | 19 | 49513379 | 49526329 | + | mRNA | protein_coding |
174241 | enst00000598936 | sg00000104870 | fcgrt-215 | 19 | 49513390 | 49524568 | + | lnc_RNA | retained_intron |
174246 | enst00000452439 | sg00000104870 | fcgrt-203 | 19 | 49513395 | 49525164 | + | lnc_RNA | retained_intron |
174249 | enst00000593431 | sg00000104870 | fcgrt-205 | 19 | 49513398 | 49525012 | + | lnc_RNA | retained_intron |
174255 | enst00000598319 | sg00000104870 | fcgrt-212 | 19 | 49513404 | 49525263 | + | mRNA | nonsense_mediated_decay |
174769 | enst00000593381 | sg00000104870 | fcgrt-204 | 19 | 49513918 | 49524644 | + | mRNA | protein_coding |
174909 | enst00000598076 | sg00000104870 | fcgrt-211 | 19 | 49514058 | 49526333 | + | mRNA | protein_coding |
-180072 | enst00000598502 | sg00000130529 | trpm4-209 | 19 | 49157832 | 49211749 | + | mRNA | nonsense_mediated_decay |
-180072 | enst00000596338 | sg00000130529 | trpm4-207 | 19 | 49157832 | 49211749 | + | lnc_RNA | retained_intron |
-180089 | enst00000427978 | sg00000130529 | trpm4-202 | 19 | 49157815 | 49211680 | + | mRNA | protein_coding |
-180112 | enst00000595519 | sg00000130529 | trpm4-205 | 19 | 49157792 | 49211836 | + | mRNA | nonsense_mediated_decay |
-180112 | enst00000252826 | sg00000130529 | trpm4-201 | 19 | 49157792 | 49211836 | + | mRNA | protein_coding |
-180112 | enst00000599628 | sg00000130529 | trpm4-213 | 19 | 49157792 | 49159921 | + | mRNA | protein_coding |
-180138 | enst00000598697 | sg00000130529 | trpm4-211 | 19 | 49157766 | 49211834 | + | mRNA | nonsense_mediated_decay |
-180163 | enst00000598691 | sg00000130529 | trpm4-210 | 19 | 49157741 | 49171373 | + | mRNA | protein_coding |
-182508 | enst00000252825 | sg00000130528 | hrc-201 | 19 | 49151198 | 49155396 | - | mRNA | protein_coding |
-182661 | enst00000595625 | sg00000130528 | hrc-203 | 19 | 49151289 | 49155243 | - | mRNA | protein_coding |
-184469 | enst00000598858 | sg00000130528 | hrc-204 | 19 | 49151199 | 49153435 | - | mRNA | protein_coding |
-184597 | enst00000595167 | sg00000130528 | hrc-202 | 19 | 49151955 | 49153307 | - | lnc_RNA | retained_intron |
-187946 | enst00000602783 | sg00000177380 | ppfia3-209 | 19 | 49149958 | 49151021 | + | lnc_RNA | retained_intron |
188854 | enst00000270645 | sg00000142552 | rcn3-201 | 19 | 49528003 | 49543633 | + | mRNA | protein_coding |
189141 | enst00000597801 | sg00000142552 | rcn3-204 | 19 | 49528290 | 49537132 | + | mRNA | protein_coding |
-189331 | enst00000602905 | sg00000177380 | ppfia3-213 | 19 | 49148573 | 49150354 | + | lnc_RNA | retained_intron |
189395 | enst00000593644 | sg00000142552 | rcn3-203 | 19 | 49528544 | 49537084 | + | lnc_RNA | processed_transcript |
189477 | enst00000598833 | sg00000142552 | rcn3-205 | 19 | 49528626 | 49546962 | + | mRNA | protein_coding |
-189803 | enst00000602897 | sg00000177380 | ppfia3-212 | 19 | 49148101 | 49151021 | + | mRNA | protein_coding |
-192217 | enst00000602800 | sg00000177380 | ppfia3-210 | 19 | 49145687 | 49146408 | + | lnc_RNA | retained_intron |
-194920 | enst00000602848 | sg00000177380 | ppfia3-211 | 19 | 49142984 | 49151026 | + | mRNA | protein_coding |
203453 | enst00000593483 | sg00000142552 | rcn3-202 | 19 | 49542602 | 49543633 | + | mRNA | protein_coding |
-209324 | enst00000602726 | sg00000177380 | ppfia3-208 | 19 | 49128580 | 49130599 | + | lnc_RNA | retained_intron |
-209577 | enst00000421230 | sg00000177380 | ppfia3-202 | 19 | 49128327 | 49142918 | + | lnc_RNA | retained_intron |
-209615 | enst00000602716 | sg00000177380 | ppfia3-207 | 19 | 49128289 | 49137240 | + | lnc_RNA | retained_intron |
-209884 | enst00000602492 | sg00000177380 | ppfia3-204 | 19 | 49128020 | 49130428 | + | lnc_RNA | retained_intron |
-210030 | enst00000602351 | sg00000177380 | ppfia3-203 | 19 | 49127874 | 49151026 | + | mRNA | protein_coding |
-212553 | enst00000602509 | sg00000177380 | ppfia3-205 | 19 | 49125351 | 49128945 | + | mRNA | protein_coding |
218146 | enst00000596477 | sg00000142546 | nosip-205 | 19 | 49555718 | 49557295 | - | lnc_RNA | retained_intron |
-218240 | enst00000602655 | sg00000177380 | ppfia3-206 | 19 | 49119664 | 49150279 | + | mRNA | nonsense_mediated_decay |
-218360 | enst00000334186 | sg00000177380 | ppfia3-201 | 19 | 49119544 | 49151026 | + | mRNA | protein_coding |
-218761 | enst00000408991 | sg00000221916 | c19orf73-201 | 19 | 49118402 | 49119143 | - | mRNA | protein_coding |
220888 | enst00000601107 | sg00000142546 | nosip-215 | 19 | 49558433 | 49560037 | - | lnc_RNA | retained_intron |
220900 | enst00000598550 | sg00000142546 | nosip-208 | 19 | 49556388 | 49560049 | - | lnc_RNA | retained_intron |
220901 | enst00000599425 | sg00000142546 | nosip-211 | 19 | 49557273 | 49560050 | - | lnc_RNA | retained_intron |
221248 | enst00000598839 | sg00000142546 | nosip-210 | 19 | 49557877 | 49560397 | - | lnc_RNA | retained_intron |
221481 | enst00000601015 | sg00000142546 | nosip-214 | 19 | 49555711 | 49560630 | - | mRNA | non_stop_decay |
221542 | enst00000598296 | sg00000142546 | nosip-206 | 19 | 49556583 | 49560691 | - | mRNA | protein_coding |
-221786 | enst00000465141 | sg00000104863 | lin7b-203 | 19 | 49116118 | 49117995 | + | lnc_RNA | retained_intron |
-222678 | enst00000474252 | sg00000104863 | lin7b-205 | 19 | 49115226 | 49118059 | + | lnc_RNA | retained_intron |
-223438 | enst00000469137 | sg00000104863 | lin7b-204 | 19 | 49114466 | 49118460 | + | lnc_RNA | retained_intron |
-223480 | enst00000486217 | sg00000104863 | lin7b-206 | 19 | 49114424 | 49115489 | + | mRNA | protein_coding |
-223495 | enst00000595200 | sg00000104863 | lin7b-207 | 19 | 49114409 | 49118015 | + | mRNA | nonsense_mediated_decay |
-223534 | enst00000221459 | sg00000104863 | lin7b-201 | 19 | 49114370 | 49118460 | + | mRNA | protein_coding |
-223580 | enst00000391864 | sg00000104863 | lin7b-202 | 19 | 49114324 | 49118460 | + | mRNA | protein_coding |
227523 | enst00000384345 | sg00000207073 | ac010619.1-201 | 19 | 49566672 | 49566772 | + | ncRNA | misc_rna |
-235493 | enst00000544278 | sg00000104852 | snrnp70-203 | 19 | 49102411 | 49108602 | + | lnc_RNA | retained_intron |
240129 | enst00000598544 | sg00000142546 | nosip-207 | 19 | 49557218 | 49579278 | - | mRNA | protein_coding |
241383 | enst00000594932 | sg00000142546 | nosip-203 | 19 | 49556603 | 49580532 | - | mRNA | nonsense_mediated_decay |
241386 | enst00000598820 | sg00000142546 | nosip-209 | 19 | 49555711 | 49580535 | - | lnc_RNA | retained_intron |
241398 | enst00000593345 | sg00000142546 | nosip-202 | 19 | 49559211 | 49580547 | - | lnc_RNA | retained_intron |
241406 | enst00000601340 | sg00000142546 | nosip-216 | 19 | 49555713 | 49580555 | - | lnc_RNA | retained_intron |
241407 | enst00000600019 | sg00000142546 | nosip-213 | 19 | 49556979 | 49580556 | - | mRNA | nonsense_mediated_decay |
241407 | enst00000596358 | sg00000142546 | nosip-204 | 19 | 49555468 | 49580556 | - | mRNA | protein_coding |
241409 | enst00000339093 | sg00000142546 | nosip-201 | 19 | 49555711 | 49580558 | - | mRNA | protein_coding |
241497 | enst00000596877 | sg00000126460 | prrg2-204 | 19 | 49580646 | 49583947 | + | mRNA | protein_coding |
242167 | enst00000246794 | sg00000126460 | prrg2-201 | 19 | 49581316 | 49591004 | + | mRNA | protein_coding |
242198 | enst00000596700 | sg00000126460 | prrg2-203 | 19 | 49581347 | 49590525 | + | lnc_RNA | processed_transcript |
242199 | enst00000597121 | sg00000126460 | prrg2-205 | 19 | 49581348 | 49591004 | + | mRNA | nonsense_mediated_decay |
242224 | enst00000543867 | sg00000126460 | prrg2-202 | 19 | 49581373 | 49591004 | + | lnc_RNA | retained_intron |
251113 | enst00000599537 | sg00000142546 | nosip-212 | 19 | 49556549 | 49590262 | - | mRNA | protein_coding |
-251380 | enst00000599687 | sg00000104852 | snrnp70-208 | 19 | 49086524 | 49101668 | + | lnc_RNA | retained_intron |
-251424 | enst00000601411 | sg00000104852 | snrnp70-210 | 19 | 49086480 | 49098459 | + | mRNA | protein_coding |
252033 | enst00000418929 | sg00000126464 | prr12-201 | 19 | 49591182 | 49626439 | + | mRNA | protein_coding |
-252409 | enst00000595231 | sg00000104852 | snrnp70-204 | 19 | 49085495 | 49108605 | + | mRNA | nonsense_mediated_decay |
-252453 | enst00000598441 | sg00000104852 | snrnp70-206 | 19 | 49085451 | 49108604 | + | mRNA | protein_coding |
-252453 | enst00000401730 | sg00000104852 | snrnp70-202 | 19 | 49085451 | 49108603 | + | mRNA | nonsense_mediated_decay |
-252453 | enst00000221448 | sg00000104852 | snrnp70-201 | 19 | 49085451 | 49108563 | + | mRNA | protein_coding |
-252453 | enst00000597936 | sg00000104852 | snrnp70-205 | 19 | 49085451 | 49090639 | + | lnc_RNA | retained_intron |
-252481 | enst00000598984 | sg00000104852 | snrnp70-207 | 19 | 49085423 | 49102118 | + | mRNA | protein_coding |
-252485 | enst00000601065 | sg00000104852 | snrnp70-209 | 19 | 49085419 | 49108598 | + | mRNA | nonsense_mediated_decay |
256373 | enst00000615927 | sg00000126464 | prr12-203 | 19 | 49595522 | 49626438 | + | mRNA | protein_coding |
-256572 | enst00000580952 | sg00000265675 | rn7sl708p-201 | 19 | 49081332 | 49081630 | + | ncRNA | misc_rna |
-264963 | enst00000221444 | sg00000104848 | kcna7-201 | 19 | 49067418 | 49072941 | - | mRNA | protein_coding |
-272828 | enst00000599795 | sg00000283663 | ac008687.8-201 | 19 | 49055793 | 49065076 | - | mRNA | nonsense_mediated_decay |
-272850 | enst00000595857 | sg00000225950 | ntf4-203 | 19 | 49061568 | 49065054 | - | mRNA | protein_coding |
-273063 | enst00000594938 | sg00000225950 | ntf4-202 | 19 | 49063739 | 49064841 | - | lnc_RNA | processed_transcript |
-273645 | enst00000599209 | sg00000268287 | ac008687.3-201 | 19 | 49064259 | 49064856 | + | lnc_RNA | lncrna |
-275907 | enst00000593537 | sg00000225950 | ntf4-201 | 19 | 49061066 | 49061997 | - | mRNA | protein_coding |
-277291 | enst00000597865 | sg00000268108 | ac008687.2-201 | 19 | 49060613 | 49061132 | + | lnc_RNA | lncrna |
-279044 | enst00000597853 | sg00000196337 | cgb7-203 | 19 | 49054275 | 49058860 | - | mRNA | protein_coding |
-279143 | enst00000598442 | sg00000283251 | ac008687.7-203 | 19 | 49057858 | 49058761 | - | lnc_RNA | processed_transcript |
-279159 | enst00000637404 | sg00000283251 | ac008687.7-202 | 19 | 49056269 | 49058745 | - | pseudogenic_transcript | transcribed_unprocessed_pseudogene |
-280153 | enst00000596965 | sg00000196337 | cgb7-202 | 19 | 49054275 | 49057751 | - | mRNA | protein_coding |
-280159 | enst00000593309 | sg00000283251 | ac008687.7-201 | 19 | 49056088 | 49057745 | - | lnc_RNA | processed_transcript |
281300 | enst00000593853 | sg00000126464 | prr12-202 | 19 | 49620449 | 49621760 | + | lnc_RNA | retained_intron |
-282125 | enst00000377280 | sg00000196337 | cgb7-201 | 19 | 49054275 | 49055779 | - | mRNA | protein_coding |
-287058 | enst00000596318 | sg00000269706 | ac008687.6-201 | 19 | 49050217 | 49050846 | - | pseudogenic_transcript | unprocessed_pseudogene |
287290 | enst00000600665 | sg00000268636 | ac011495.2-201 | 19 | 49625994 | 49626439 | - | lnc_RNA | lncrna |
-288798 | enst00000448456 | sg00000213030 | cgb8-201 | 19 | 49047638 | 49049106 | - | mRNA | protein_coding |
-294056 | enst00000301408 | sg00000189052 | cgb5-201 | 19 | 49043848 | 49045311 | + | mRNA | protein_coding |
-295730 | enst00000593746 | sg00000268669 | ac008687.5-201 | 19 | 49042174 | 49042731 | + | pseudogenic_transcript | unprocessed_pseudogene |
-298866 | enst00000591913 | sg00000267685 | ntf6b-201 | 19 | 49038479 | 49039038 | - | pseudogenic_transcript | unprocessed_pseudogene |
300973 | enst00000601532 | sg00000126458 | rras-202 | 19 | 49635812 | 49640122 | - | lnc_RNA | retained_intron |
300994 | enst00000246792 | sg00000126458 | rras-201 | 19 | 49635292 | 49640143 | - | mRNA | protein_coding |
-301009 | enst00000601167 | sg00000267631 | cgb1-202 | 19 | 49035653 | 49036895 | - | mRNA | protein_coding |
-301009 | enst00000591656 | sg00000267335 | ac008687.1-201 | 19 | 49022953 | 49036895 | - | mRNA | protein_coding |
-301019 | enst00000604577 | sg00000267335 | ac008687.1-202 | 19 | 49023146 | 49036885 | - | mRNA | protein_coding |
-301088 | enst00000301407 | sg00000267631 | cgb1-201 | 19 | 49035610 | 49036816 | - | mRNA | protein_coding |
303060 | enst00000360565 | sg00000126461 | scaf1-201 | 19 | 49642209 | 49658642 | + | mRNA | protein_coding |
303511 | enst00000598359 | sg00000126461 | scaf1-203 | 19 | 49642660 | 49650998 | + | mRNA | protein_coding |
305681 | enst00000601038 | sg00000126461 | scaf1-204 | 19 | 49644830 | 49646558 | + | mRNA | protein_coding |
305774 | enst00000595242 | sg00000126461 | scaf1-202 | 19 | 49644923 | 49646619 | + | mRNA | protein_coding |
-305926 | enst00000359342 | sg00000104818 | cgb2-201 | 19 | 49031978 | 49033238 | + | mRNA | protein_coding |
-305992 | enst00000474913 | sg00000104818 | cgb2-202 | 19 | 49031912 | 49033154 | + | mRNA | protein_coding |
-308178 | enst00000591094 | sg00000267099 | ntf6g-201 | 19 | 49029726 | 49030341 | + | pseudogenic_transcript | unprocessed_pseudogene |
-311884 | enst00000591175 | sg00000267019 | ntf6a-201 | 19 | 49025461 | 49026020 | - | pseudogenic_transcript | unprocessed_pseudogene |
-313571 | enst00000357383 | sg00000104827 | cgb3-201 | 19 | 49022869 | 49024333 | - | mRNA | protein_coding |
-317381 | enst00000637680 | sg00000268655 | ac008687.4-201 | 19 | 49017496 | 49020523 | - | mRNA | protein_coding |
-318420 | enst00000600007 | sg00000268655 | ac008687.4-202 | 19 | 49018247 | 49019484 | - | lnc_RNA | processed_transcript |
-320814 | enst00000649238 | sg00000104826 | lhb-201 | 19 | 49015980 | 49017090 | - | mRNA | protein_coding |
-321084 | enst00000649284 | sg00000104826 | lhb-202 | 19 | 49016075 | 49016820 | - | lnc_RNA | retained_intron |
321854 | enst00000596644 | sg00000126456 | irf3-211 | 19 | 49659575 | 49661003 | - | lnc_RNA | retained_intron |
322375 | enst00000599680 | sg00000126456 | irf3-224 | 19 | 49659569 | 49661524 | - | lnc_RNA | processed_transcript |
-322653 | enst00000595002 | sg00000183207 | ruvbl2-205 | 19 | 49015251 | 49015926 | + | lnc_RNA | retained_intron |
323180 | enst00000602190 | sg00000126456 | irf3-231 | 19 | 49661595 | 49662329 | - | lnc_RNA | processed_transcript |
324720 | enst00000597369 | sg00000126456 | irf3-218 | 19 | 49663236 | 49663869 | - | lnc_RNA | retained_intron |
325374 | enst00000595240 | sg00000126456 | irf3-210 | 19 | 49662375 | 49664523 | - | lnc_RNA | retained_intron |
325574 | enst00000596788 | sg00000126456 | irf3-214 | 19 | 49662585 | 49664723 | - | mRNA | nonsense_mediated_decay |
325689 | enst00000442265 | sg00000126456 | irf3-204 | 19 | 49662539 | 49664838 | - | mRNA | protein_coding |
325993 | enst00000616144 | sg00000126453 | bcl2l12-212 | 19 | 49665142 | 49673915 | + | mRNA | protein_coding |
325993 | enst00000614495 | sg00000126453 | bcl2l12-211 | 19 | 49665142 | 49673915 | + | mRNA | protein_coding |
325993 | enst00000611631 | sg00000126453 | bcl2l12-210 | 19 | 49665142 | 49673915 | + | mRNA | protein_coding |
325993 | enst00000619007 | sg00000126453 | bcl2l12-213 | 19 | 49665142 | 49673915 | + | mRNA | protein_coding |
326020 | enst00000309877 | sg00000126456 | irf3-201 | 19 | 49659572 | 49665169 | - | mRNA | protein_coding |
326082 | enst00000600911 | sg00000126456 | irf3-227 | 19 | 49659572 | 49665231 | - | mRNA | protein_coding |
326417 | enst00000441864 | sg00000126453 | bcl2l12-203 | 19 | 49665566 | 49673859 | + | mRNA | protein_coding |
326417 | enst00000246785 | sg00000126453 | bcl2l12-202 | 19 | 49665566 | 49673916 | + | mRNA | protein_coding |
326464 | enst00000596756 | sg00000126456 | irf3-212 | 19 | 49659758 | 49665613 | - | mRNA | protein_coding |
326556 | enst00000600022 | sg00000126456 | irf3-225 | 19 | 49659579 | 49665705 | - | mRNA | protein_coding |
326556 | enst00000599223 | sg00000126456 | irf3-223 | 19 | 49659579 | 49665705 | - | mRNA | protein_coding |
326556 | enst00000596765 | sg00000126456 | irf3-213 | 19 | 49659579 | 49665705 | - | mRNA | protein_coding |
326556 | enst00000593922 | sg00000126456 | irf3-207 | 19 | 49659579 | 49665705 | - | mRNA | protein_coding |
326582 | enst00000599144 | sg00000126456 | irf3-222 | 19 | 49659579 | 49665731 | - | mRNA | protein_coding |
326605 | enst00000597180 | sg00000126456 | irf3-216 | 19 | 49663421 | 49665754 | - | lnc_RNA | processed_transcript |
326606 | enst00000596822 | sg00000126456 | irf3-215 | 19 | 49659572 | 49665755 | - | mRNA | protein_coding |
326630 | enst00000598108 | sg00000126456 | irf3-220 | 19 | 49662069 | 49665779 | - | mRNA | protein_coding |
326631 | enst00000594387 | sg00000126456 | irf3-208 | 19 | 49662427 | 49665780 | - | lnc_RNA | retained_intron |
326635 | enst00000601373 | sg00000126456 | irf3-229 | 19 | 49662239 | 49665784 | - | mRNA | protein_coding |
326639 | enst00000595034 | sg00000126456 | irf3-209 | 19 | 49662133 | 49665788 | - | mRNA | protein_coding |
326653 | enst00000601291 | sg00000126456 | irf3-228 | 19 | 49659572 | 49665802 | - | mRNA | protein_coding |
326686 | enst00000593337 | sg00000126456 | irf3-205 | 19 | 49662301 | 49665835 | - | mRNA | protein_coding |
326693 | enst00000598808 | sg00000126456 | irf3-221 | 19 | 49659632 | 49665842 | - | mRNA | protein_coding |
326694 | enst00000600453 | sg00000126456 | irf3-226 | 19 | 49663373 | 49665843 | - | mRNA | protein_coding |
326698 | enst00000593818 | sg00000126456 | irf3-206 | 19 | 49662175 | 49665847 | - | mRNA | protein_coding |
326708 | enst00000597198 | sg00000126456 | irf3-217 | 19 | 49659573 | 49665857 | - | mRNA | protein_coding |
326708 | enst00000597636 | sg00000126456 | irf3-219 | 19 | 49659575 | 49665857 | - | mRNA | nonsense_mediated_decay |
326708 | enst00000377139 | sg00000126456 | irf3-203 | 19 | 49659572 | 49665857 | - | mRNA | protein_coding |
326710 | enst00000601809 | sg00000126456 | irf3-230 | 19 | 49662454 | 49665859 | - | mRNA | protein_coding |
326726 | enst00000377135 | sg00000126456 | irf3-202 | 19 | 49659570 | 49665875 | - | mRNA | protein_coding |
326812 | enst00000594157 | sg00000126453 | bcl2l12-204 | 19 | 49665961 | 49673916 | + | mRNA | protein_coding |
326812 | enst00000598979 | sg00000126453 | bcl2l12-207 | 19 | 49665961 | 49673916 | + | mRNA | nonsense_mediated_decay |
326849 | enst00000601168 | sg00000126453 | bcl2l12-209 | 19 | 49665998 | 49667030 | + | lnc_RNA | retained_intron |
326850 | enst00000600947 | sg00000126453 | bcl2l12-208 | 19 | 49665999 | 49673916 | + | mRNA | protein_coding |
326858 | enst00000246784 | sg00000126453 | bcl2l12-201 | 19 | 49666007 | 49673916 | + | mRNA | protein_coding |
326864 | enst00000598306 | sg00000126453 | bcl2l12-206 | 19 | 49666013 | 49673916 | + | mRNA | protein_coding |
-327998 | enst00000612887 | sg00000273898 | mir6798-201 | 19 | 49009906 | 49009972 | + | miRNA | mirna |
332960 | enst00000594793 | sg00000126453 | bcl2l12-205 | 19 | 49672109 | 49673915 | + | lnc_RNA | processed_transcript |
-333615 | enst00000627972 | sg00000183207 | ruvbl2-212 | 19 | 49004289 | 49015650 | + | mRNA | protein_coding |
336637 | enst00000529284 | sg00000126457 | prmt1-212 | 19 | 49675786 | 49684816 | + | mRNA | protein_coding |
336748 | enst00000532489 | sg00000126457 | prmt1-217 | 19 | 49675897 | 49688447 | + | mRNA | protein_coding |
337077 | enst00000527382 | sg00000126457 | prmt1-207 | 19 | 49676226 | 49685032 | + | mRNA | protein_coding |
337092 | enst00000528623 | sg00000126457 | prmt1-211 | 19 | 49676241 | 49681979 | + | mRNA | protein_coding |
337924 | enst00000534465 | sg00000126457 | prmt1-219 | 19 | 49677073 | 49685037 | + | mRNA | protein_coding |
338003 | enst00000610806 | sg00000126457 | prmt1-221 | 19 | 49677152 | 49688450 | + | mRNA | protein_coding |
338003 | enst00000391851 | sg00000126457 | prmt1-201 | 19 | 49677152 | 49688447 | + | mRNA | protein_coding |
338024 | enst00000534280 | sg00000126457 | prmt1-218 | 19 | 49677173 | 49684069 | + | mRNA | nonsense_mediated_decay |
338100 | enst00000534676 | sg00000126457 | prmt1-220 | 19 | 49677249 | 49685215 | + | lnc_RNA | retained_intron |
338118 | enst00000525915 | sg00000126457 | prmt1-205 | 19 | 49677267 | 49680119 | + | lnc_RNA | retained_intron |
338123 | enst00000454376 | sg00000126457 | prmt1-202 | 19 | 49677272 | 49688447 | + | mRNA | protein_coding |
338128 | enst00000525616 | sg00000126457 | prmt1-204 | 19 | 49677277 | 49685028 | + | lnc_RNA | retained_intron |
338145 | enst00000524771 | sg00000126457 | prmt1-203 | 19 | 49677294 | 49684962 | + | mRNA | protein_coding |
338353 | enst00000529836 | sg00000126457 | prmt1-214 | 19 | 49677502 | 49682249 | + | mRNA | protein_coding |
-338585 | enst00000594338 | sg00000183207 | ruvbl2-204 | 19 | 48999319 | 49015894 | + | lnc_RNA | retained_intron |
-338597 | enst00000640699 | sg00000183207 | ruvbl2-214 | 19 | 48999307 | 49004236 | + | mRNA | protein_coding |
-338597 | enst00000639391 | sg00000183207 | ruvbl2-213 | 19 | 48999307 | 49001401 | + | mRNA | protein_coding |
339076 | enst00000526224 | sg00000126457 | prmt1-206 | 19 | 49678225 | 49684818 | + | mRNA | protein_coding |
340626 | enst00000527412 | sg00000126457 | prmt1-208 | 19 | 49679775 | 49682249 | + | lnc_RNA | retained_intron |
342968 | enst00000615402 | sg00000274306 | mir5088-201 | 19 | 49682117 | 49682195 | + | miRNA | mirna |
-343994 | enst00000593570 | sg00000183207 | ruvbl2-202 | 19 | 48993910 | 49009882 | + | mRNA | nonsense_mediated_decay |
-344005 | enst00000221413 | sg00000183207 | ruvbl2-201 | 19 | 48993899 | 49015926 | + | mRNA | nonsense_mediated_decay |
-344006 | enst00000596247 | sg00000183207 | ruvbl2-208 | 19 | 48993898 | 49015929 | + | mRNA | nonsense_mediated_decay |
-344006 | enst00000598768 | sg00000183207 | ruvbl2-210 | 19 | 48993898 | 48999364 | + | lnc_RNA | processed_transcript |
-344014 | enst00000594017 | sg00000183207 | ruvbl2-203 | 19 | 48993890 | 49010340 | + | lnc_RNA | retained_intron |
-344015 | enst00000595811 | sg00000183207 | ruvbl2-207 | 19 | 48993889 | 49004382 | + | mRNA | nonsense_mediated_decay |
-344017 | enst00000595090 | sg00000183207 | ruvbl2-206 | 19 | 48993887 | 49015970 | + | mRNA | protein_coding |
-344288 | enst00000596837 | sg00000183207 | ruvbl2-209 | 19 | 48993616 | 49007368 | + | mRNA | protein_coding |
-344342 | enst00000601968 | sg00000183207 | ruvbl2-211 | 19 | 48993562 | 49015892 | + | mRNA | protein_coding |
344486 | enst00000529650 | sg00000126457 | prmt1-213 | 19 | 49683635 | 49684797 | + | lnc_RNA | retained_intron |
-344594 | enst00000263276 | sg00000104812 | gys1-201 | 19 | 48968130 | 48993310 | - | mRNA | protein_coding |
-344595 | enst00000323798 | sg00000104812 | gys1-202 | 19 | 48968130 | 48993309 | - | mRNA | protein_coding |
-344621 | enst00000457974 | sg00000104812 | gys1-203 | 19 | 48987194 | 48993283 | - | lnc_RNA | processed_transcript |
345678 | enst00000530070 | sg00000126457 | prmt1-215 | 19 | 49684827 | 49685555 | + | lnc_RNA | processed_transcript |
346156 | enst00000530361 | sg00000126457 | prmt1-216 | 19 | 49685305 | 49688419 | + | lnc_RNA | processed_transcript |
346575 | enst00000528126 | sg00000126457 | prmt1-210 | 19 | 49685724 | 49686726 | + | lnc_RNA | retained_intron |
348704 | enst00000527866 | sg00000126457 | prmt1-209 | 19 | 49687853 | 49689029 | + | lnc_RNA | processed_transcript |
349515 | enst00000420022 | sg00000224420 | adm5-201 | 19 | 49688664 | 49690575 | + | mRNA | protein_coding |
351424 | enst00000596472 | sg00000268677 | ac011495.3-201 | 19 | 49688853 | 49690573 | - | lnc_RNA | lncrna |
351749 | enst00000594038 | sg00000169169 | cpt1c-205 | 19 | 49690898 | 49697383 | + | mRNA | nonsense_mediated_decay |
351961 | enst00000323446 | sg00000169169 | cpt1c-202 | 19 | 49691110 | 49713731 | + | mRNA | protein_coding |
351963 | enst00000598259 | sg00000169169 | cpt1c-216 | 19 | 49691112 | 49713043 | + | mRNA | nonsense_mediated_decay |
351967 | enst00000599023 | sg00000169169 | cpt1c-221 | 19 | 49691116 | 49711065 | + | lnc_RNA | retained_intron |
351967 | enst00000392518 | sg00000169169 | cpt1c-203 | 19 | 49691116 | 49713731 | + | mRNA | protein_coding |
351987 | enst00000598293 | sg00000169169 | cpt1c-217 | 19 | 49691136 | 49713672 | + | mRNA | protein_coding |
351987 | enst00000598396 | sg00000169169 | cpt1c-218 | 19 | 49691136 | 49704787 | + | mRNA | protein_coding |
351990 | enst00000598714 | sg00000169169 | cpt1c-220 | 19 | 49691139 | 49696583 | + | lnc_RNA | processed_transcript |
351995 | enst00000405931 | sg00000169169 | cpt1c-204 | 19 | 49691144 | 49713731 | + | mRNA | protein_coding |
351999 | enst00000600944 | sg00000169169 | cpt1c-223 | 19 | 49691148 | 49697935 | + | lnc_RNA | retained_intron |
351999 | enst00000596922 | sg00000169169 | cpt1c-213 | 19 | 49691148 | 49700694 | + | mRNA | nonsense_mediated_decay |
352004 | enst00000602019 | sg00000169169 | cpt1c-224 | 19 | 49691153 | 49700689 | + | mRNA | protein_coding |
352415 | enst00000594587 | sg00000169169 | cpt1c-207 | 19 | 49691564 | 49701396 | + | mRNA | protein_coding |
-352430 | enst00000484289 | sg00000104812 | gys1-205 | 19 | 48981431 | 48985474 | - | lnc_RNA | retained_intron |
352440 | enst00000595969 | sg00000169169 | cpt1c-211 | 19 | 49691589 | 49701503 | + | mRNA | protein_coding |
352443 | enst00000595568 | sg00000169169 | cpt1c-209 | 19 | 49691592 | 49705964 | + | mRNA | nonsense_mediated_decay |
352489 | enst00000295404 | sg00000169169 | cpt1c-201 | 19 | 49691638 | 49710631 | + | lnc_RNA | retained_intron |
-359671 | enst00000496048 | sg00000104812 | gys1-206 | 19 | 48970944 | 48978233 | - | lnc_RNA | retained_intron |
-359918 | enst00000472004 | sg00000104812 | gys1-204 | 19 | 48970750 | 48977986 | - | lnc_RNA | retained_intron |
362433 | enst00000596701 | sg00000169169 | cpt1c-212 | 19 | 49701582 | 49712343 | + | lnc_RNA | retained_intron |
365538 | enst00000594431 | sg00000169169 | cpt1c-206 | 19 | 49704687 | 49706073 | + | lnc_RNA | retained_intron |
366930 | enst00000595031 | sg00000169169 | cpt1c-208 | 19 | 49706079 | 49713731 | + | mRNA | protein_coding |
-367195 | enst00000594220 | sg00000104812 | gys1-207 | 19 | 48970283 | 48970709 | - | mRNA | protein_coding |
372415 | enst00000595901 | sg00000169169 | cpt1c-210 | 19 | 49711564 | 49713626 | + | lnc_RNA | retained_intron |
-372595 | enst00000331825 | sg00000087086 | ftl-201 | 19 | 48965309 | 48966879 | + | mRNA | protein_coding |
373406 | enst00000599937 | sg00000169169 | cpt1c-222 | 19 | 49712555 | 49713731 | + | lnc_RNA | retained_intron |
373479 | enst00000598647 | sg00000169169 | cpt1c-219 | 19 | 49712628 | 49713731 | + | lnc_RNA | retained_intron |
373570 | enst00000598072 | sg00000169169 | cpt1c-215 | 19 | 49712719 | 49713724 | + | lnc_RNA | retained_intron |
373844 | enst00000597099 | sg00000169169 | cpt1c-214 | 19 | 49712993 | 49713731 | + | mRNA | protein_coding |
-373914 | enst00000594305 | sg00000267898 | ac026803.2-202 | 19 | 48963990 | 48965029 | + | lnc_RNA | lncrna |
-373929 | enst00000599784 | sg00000267898 | ac026803.2-201 | 19 | 48963975 | 48965158 | + | lnc_RNA | lncrna |
380932 | enst00000498085 | sg00000243829 | ac011495.1-201 | 19 | 49719498 | 49720081 | - | pseudogenic_transcript | processed_pseudogene |
-382051 | enst00000513217 | sg00000087088 | bax-210 | 19 | 48955853 | 48961197 | + | lnc_RNA | retained_intron |
-382396 | enst00000503726 | sg00000087088 | bax-208 | 19 | 48955508 | 48960835 | + | lnc_RNA | retained_intron |
-382975 | enst00000515540 | sg00000087088 | bax-212 | 19 | 48954929 | 48956316 | + | mRNA | nonsense_mediated_decay |
-382975 | enst00000539787 | sg00000087088 | bax-213 | 19 | 48954929 | 48961097 | + | mRNA | protein_coding |
-382975 | enst00000356483 | sg00000087088 | bax-204 | 19 | 48954929 | 48961636 | + | mRNA | nonsense_mediated_decay |
-382975 | enst00000293288 | sg00000087088 | bax-201 | 19 | 48954929 | 48961798 | + | mRNA | protein_coding |
-382975 | enst00000354470 | sg00000087088 | bax-203 | 19 | 48954929 | 48961637 | + | mRNA | protein_coding |
-382975 | enst00000506183 | sg00000087088 | bax-209 | 19 | 48954929 | 48961639 | + | mRNA | protein_coding |
-382975 | enst00000391871 | sg00000087088 | bax-205 | 19 | 48954929 | 48961795 | + | mRNA | protein_coding |
-382975 | enst00000415969 | sg00000087088 | bax-206 | 19 | 48954929 | 48961636 | + | mRNA | protein_coding |
-383007 | enst00000513545 | sg00000087088 | bax-211 | 19 | 48954897 | 48961713 | + | lnc_RNA | retained_intron |
-383029 | enst00000345358 | sg00000087088 | bax-202 | 19 | 48954875 | 48961798 | + | mRNA | protein_coding |
-383089 | enst00000502487 | sg00000087088 | bax-207 | 19 | 48954815 | 48961704 | + | lnc_RNA | retained_intron |
401182 | enst00000599325 | sg00000126467 | tsks-203 | 19 | 49739753 | 49740331 | - | lnc_RNA | retained_intron |
-404146 | enst00000520557 | sg00000104808 | dhdh-202 | 19 | 48933758 | 48944968 | + | mRNA | nonsense_mediated_decay |
-404199 | enst00000522614 | sg00000104808 | dhdh-203 | 19 | 48933705 | 48944963 | + | mRNA | protein_coding |
-404202 | enst00000523250 | sg00000104808 | dhdh-204 | 19 | 48933702 | 48944959 | + | mRNA | protein_coding |
-404205 | enst00000221403 | sg00000104808 | dhdh-201 | 19 | 48933699 | 48944969 | + | mRNA | protein_coding |
408229 | enst00000358830 | sg00000126467 | tsks-202 | 19 | 49739757 | 49747378 | - | mRNA | protein_coding |
-411733 | enst00000569130 | sg00000260366 | ac026803.1-201 | 19 | 48926171 | 48926444 | + | lnc_RNA | lncrna |
-418904 | enst00000492367 | sg00000104805 | nucb1-212 | 19 | 48919000 | 48923268 | + | lnc_RNA | retained_intron |
-419013 | enst00000416432 | sg00000235191 | nucb1-as1-201 | 19 | 48910930 | 48918891 | - | lnc_RNA | lncrna |
-419159 | enst00000469291 | sg00000104805 | nucb1-210 | 19 | 48918745 | 48921264 | + | lnc_RNA | retained_intron |
-419528 | enst00000460125 | sg00000104805 | nucb1-208 | 19 | 48918376 | 48919148 | + | lnc_RNA | retained_intron |
424157 | enst00000246801 | sg00000126467 | tsks-201 | 19 | 49739760 | 49763306 | - | mRNA | protein_coding |
425481 | enst00000383872 | sg00000206599 | rnu6-841p-201 | 19 | 49764524 | 49764630 | - | snRNA | snrna |
-426686 | enst00000465524 | sg00000104805 | nucb1-209 | 19 | 48911218 | 48921866 | + | lnc_RNA | retained_intron |
427819 | enst00000354293 | sg00000196961 | ap2a1-201 | 19 | 49766968 | 49807112 | + | mRNA | protein_coding |
427858 | enst00000600199 | sg00000196961 | ap2a1-206 | 19 | 49767007 | 49797562 | + | lnc_RNA | processed_transcript |
427985 | enst00000359032 | sg00000196961 | ap2a1-202 | 19 | 49767134 | 49807110 | + | mRNA | protein_coding |
427987 | enst00000597774 | sg00000196961 | ap2a1-205 | 19 | 49767136 | 49806791 | + | mRNA | nonsense_mediated_decay |
-437106 | enst00000424608 | sg00000104805 | nucb1-204 | 19 | 48900798 | 48919259 | + | mRNA | protein_coding |
-437338 | enst00000451312 | sg00000104805 | nucb1-206 | 19 | 48900566 | 48905841 | + | mRNA | protein_coding |
-437534 | enst00000411700 | sg00000104805 | nucb1-203 | 19 | 48900370 | 48905882 | + | mRNA | protein_coding |
-437549 | enst00000443560 | sg00000104805 | nucb1-205 | 19 | 48900355 | 48905841 | + | mRNA | nonsense_mediated_decay |
-437565 | enst00000485798 | sg00000104805 | nucb1-211 | 19 | 48900339 | 48922944 | + | lnc_RNA | processed_transcript |
-437581 | enst00000452087 | sg00000104805 | nucb1-207 | 19 | 48900323 | 48918744 | + | mRNA | protein_coding |
-437584 | enst00000407032 | sg00000104805 | nucb1-202 | 19 | 48900320 | 48923271 | + | mRNA | protein_coding |
-437592 | enst00000405315 | sg00000104805 | nucb1-201 | 19 | 48900312 | 48923372 | + | mRNA | protein_coding |
-439160 | enst00000221399 | sg00000104804 | tulp2-201 | 19 | 48880967 | 48898744 | - | mRNA | protein_coding |
-439271 | enst00000518572 | sg00000104804 | tulp2-202 | 19 | 48888068 | 48898633 | - | mRNA | protein_coding |
-439522 | enst00000522945 | sg00000104804 | tulp2-206 | 19 | 48888258 | 48898382 | - | mRNA | protein_coding |
-440445 | enst00000520977 | sg00000104804 | tulp2-203 | 19 | 48889528 | 48897459 | - | mRNA | protein_coding |
-441165 | enst00000522229 | sg00000104804 | tulp2-204 | 19 | 48895375 | 48896739 | - | lnc_RNA | retained_intron |
452717 | enst00000620297 | sg00000276270 | mir6799-201 | 19 | 49791866 | 49791934 | + | miRNA | mirna |
-455779 | enst00000522341 | sg00000104804 | tulp2-205 | 19 | 48880971 | 48882125 | - | mRNA | protein_coding |
461543 | enst00000593788 | sg00000196961 | ap2a1-203 | 19 | 49800692 | 49801733 | + | lnc_RNA | retained_intron |
462398 | enst00000600466 | sg00000196961 | ap2a1-207 | 19 | 49801547 | 49804540 | + | lnc_RNA | retained_intron |
463373 | enst00000594838 | sg00000196961 | ap2a1-204 | 19 | 49802522 | 49805933 | + | lnc_RNA | retained_intron |
-463586 | enst00000600406 | sg00000087074 | ppp1r15a-202 | 19 | 48874318 | 48876042 | + | mRNA | protein_coding |
-465483 | enst00000200453 | sg00000087074 | ppp1r15a-201 | 19 | 48872421 | 48876058 | + | mRNA | protein_coding |
465727 | enst00000601356 | sg00000196961 | ap2a1-208 | 19 | 49804876 | 49807113 | + | lnc_RNA | retained_intron |
-469287 | enst00000263265 | sg00000105559 | plekha4-201 | 19 | 48837097 | 48868617 | - | mRNA | protein_coding |
-469450 | enst00000355496 | sg00000105559 | plekha4-202 | 19 | 48837097 | 48868454 | - | mRNA | protein_coding |
469490 | enst00000529634 | sg00000010361 | fuz-214 | 19 | 49806885 | 49808639 | - | mRNA | protein_coding |
469676 | enst00000534138 | sg00000010361 | fuz-218 | 19 | 49808123 | 49808825 | - | lnc_RNA | retained_intron |
469784 | enst00000600669 | sg00000269194 | ac006942.1-201 | 19 | 49808933 | 49809738 | + | lnc_RNA | lncrna |
-470309 | enst00000594100 | sg00000105559 | plekha4-204 | 19 | 48859097 | 48867595 | - | mRNA | protein_coding |
470716 | enst00000527973 | sg00000010361 | fuz-210 | 19 | 49808619 | 49809865 | - | lnc_RNA | processed_transcript |
-472347 | enst00000596982 | sg00000105559 | plekha4-208 | 19 | 48859097 | 48865557 | - | mRNA | nonsense_mediated_decay |
474007 | enst00000525370 | sg00000010361 | fuz-204 | 19 | 49806893 | 49813156 | - | mRNA | nonsense_mediated_decay |
474026 | enst00000528094 | sg00000010361 | fuz-212 | 19 | 49806890 | 49813175 | - | mRNA | protein_coding |
474029 | enst00000526575 | sg00000010361 | fuz-207 | 19 | 49811384 | 49813178 | - | mRNA | protein_coding |
474041 | enst00000525130 | sg00000010361 | fuz-203 | 19 | 49806869 | 49813190 | - | mRNA | nonsense_mediated_decay |
474086 | enst00000525800 | sg00000010361 | fuz-205 | 19 | 49811431 | 49813235 | - | mRNA | nonsense_mediated_decay |
474092 | enst00000534008 | sg00000010361 | fuz-217 | 19 | 49811365 | 49813241 | - | lnc_RNA | processed_transcript |
474100 | enst00000528043 | sg00000010361 | fuz-211 | 19 | 49809395 | 49813249 | - | mRNA | nonsense_mediated_decay |
474100 | enst00000533418 | sg00000010361 | fuz-216 | 19 | 49806890 | 49813249 | - | mRNA | protein_coding |
474124 | enst00000377092 | sg00000010361 | fuz-202 | 19 | 49806920 | 49813273 | - | mRNA | nonsense_mediated_decay |
474135 | enst00000526435 | sg00000010361 | fuz-206 | 19 | 49812280 | 49813284 | - | mRNA | nonsense_mediated_decay |
474137 | enst00000527585 | sg00000010361 | fuz-209 | 19 | 49811363 | 49813286 | - | mRNA | nonsense_mediated_decay |
474143 | enst00000313777 | sg00000010361 | fuz-201 | 19 | 49806866 | 49813292 | - | mRNA | protein_coding |
474150 | enst00000527111 | sg00000010361 | fuz-208 | 19 | 49812251 | 49813299 | - | mRNA | nonsense_mediated_decay |
474160 | enst00000531017 | sg00000010361 | fuz-215 | 19 | 49811036 | 49813309 | - | lnc_RNA | retained_intron |
-477786 | enst00000596713 | sg00000105559 | plekha4-207 | 19 | 48858861 | 48860118 | - | lnc_RNA | processed_transcript |
478227 | enst00000529302 | sg00000010361 | fuz-213 | 19 | 49811381 | 49817376 | - | mRNA | protein_coding |
-478522 | enst00000595867 | sg00000105559 | plekha4-206 | 19 | 48845551 | 48859382 | - | mRNA | protein_coding |
-478530 | enst00000594195 | sg00000105559 | plekha4-205 | 19 | 48852238 | 48859374 | - | mRNA | protein_coding |
479130 | enst00000622402 | sg00000104973 | med25-214 | 19 | 49818279 | 49836980 | + | mRNA | protein_coding |
479130 | enst00000620467 | sg00000104973 | med25-213 | 19 | 49818279 | 49836980 | + | mRNA | protein_coding |
479130 | enst00000612854 | sg00000104973 | med25-210 | 19 | 49818279 | 49836980 | + | mRNA | protein_coding |
479130 | enst00000617849 | sg00000104973 | med25-211 | 19 | 49818279 | 49836980 | + | mRNA | protein_coding |
479133 | enst00000593595 | sg00000104973 | med25-203 | 19 | 49818282 | 49818882 | + | lnc_RNA | retained_intron |
479140 | enst00000593636 | sg00000104973 | med25-204 | 19 | 49818289 | 49819950 | + | lnc_RNA | retained_intron |
479140 | enst00000312865 | sg00000104973 | med25-201 | 19 | 49818289 | 49836979 | + | mRNA | protein_coding |
479140 | enst00000593767 | sg00000104973 | med25-205 | 19 | 49818289 | 49840383 | + | mRNA | protein_coding |
479193 | enst00000618715 | sg00000104973 | med25-212 | 19 | 49818342 | 49836962 | + | mRNA | protein_coding |
479193 | enst00000538643 | sg00000104973 | med25-202 | 19 | 49818342 | 49836962 | + | mRNA | protein_coding |
479193 | enst00000595185 | sg00000104973 | med25-207 | 19 | 49818342 | 49836962 | + | mRNA | protein_coding |
479193 | enst00000612791 | sg00000104973 | med25-209 | 19 | 49818342 | 49836962 | + | mRNA | protein_coding |
-485598 | enst00000597406 | sg00000105559 | plekha4-210 | 19 | 48845193 | 48852306 | - | lnc_RNA | retained_intron |
491694 | enst00000599722 | sg00000104973 | med25-208 | 19 | 49830843 | 49832415 | + | lnc_RNA | retained_intron |
-492308 | enst00000593696 | sg00000105559 | plekha4-203 | 19 | 48845141 | 48845596 | - | lnc_RNA | retained_intron |
-492353 | enst00000597129 | sg00000105559 | plekha4-209 | 19 | 48837110 | 48845551 | - | mRNA | protein_coding |
492869 | enst00000614963 | sg00000284114 | mir6800-201 | 19 | 49832018 | 49832099 | + | miRNA | mirna |
493735 | enst00000594998 | sg00000104973 | med25-206 | 19 | 49832884 | 49836979 | + | lnc_RNA | retained_intron |
-499590 | enst00000601146 | sg00000105559 | plekha4-211 | 19 | 48837183 | 48838314 | - | lnc_RNA | retained_intron |
Source file: /hps/research1/birney/users/adrien/analyses/cancer_DNA_promethion/run_1_2_3_4/DNA_pipeline_2/results/methylation/pycometh_meth_comp_CGI_3/out.tsv.gz
MD5 hash: 9aa0e3f69cb4e12345c3758eb68a5efc