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CpG interval report generated on 20/05/20 with pycoMeth 0.4.6
Interval details
| pvalue rank | chromosome | start | end | length | number of samples | number of CpGs | pvalue | adjusted pvalue |
|---|---|---|---|---|---|---|---|---|
| #173 | 12 | 49263835 | 49265711 | 1876 | 3 | 46 | 1.18636e-14 | 6.81988e-13 |
Methylation log-likelihood ratio by CpG position
Distribution of CpG methylation log-likelihood ratio by sample
Closest transcripts TSS
| distance to tss | transcript id | gene id | transcript name | chromosome | start | end | strand | feature type | transcript biotype |
|---|---|---|---|---|---|---|---|---|---|
| 0 | enst00000549023 | sg00000258101 | ac010173.1-201 | 12 | 49232790 | 49264756 | - | lnc_RNA | lncrna |
| 0 | enst00000301072 | sg00000167553 | tuba1c-201 | 12 | 49264907 | 49274603 | + | mRNA | protein_coding |
| 0 | enst00000549183 | sg00000167553 | tuba1c-204 | 12 | 49265081 | 49270196 | + | mRNA | protein_coding |
| 0 | enst00000639419 | sg00000167553 | tuba1c-210 | 12 | 49265082 | 49273330 | + | mRNA | protein_coding |
| 4075 | enst00000548470 | sg00000167553 | tuba1c-203 | 12 | 49269786 | 49273166 | + | lnc_RNA | retained_intron |
| 7595 | enst00000550468 | sg00000258232 | ac125611.3-201 | 12 | 49265156 | 49273306 | - | lnc_RNA | lncrna |
| 27541 | enst00000551194 | sg00000135406 | prph-207 | 12 | 49293252 | 49293997 | + | lnc_RNA | processed_transcript |
| 29436 | enst00000257860 | sg00000135406 | prph-201 | 12 | 49295147 | 49298686 | + | mRNA | protein_coding |
| 29651 | enst00000451891 | sg00000135406 | prph-202 | 12 | 49295362 | 49297238 | + | mRNA | protein_coding |
| 30040 | enst00000533401 | sg00000135406 | prph-205 | 12 | 49295751 | 49297424 | + | lnc_RNA | retained_intron |
| 30055 | enst00000537252 | sg00000135406 | prph-206 | 12 | 49295766 | 49296890 | + | lnc_RNA | retained_intron |
| 31291 | enst00000532332 | sg00000135406 | prph-204 | 12 | 49297002 | 49298592 | + | mRNA | protein_coding |
| 31410 | enst00000530631 | sg00000135406 | prph-203 | 12 | 49297121 | 49298648 | + | lnc_RNA | retained_intron |
| -35792 | enst00000552125 | sg00000167553 | tuba1c-208 | 12 | 49228043 | 49269937 | + | mRNA | nonsense_mediated_decay |
| -35905 | enst00000552448 | sg00000167553 | tuba1c-209 | 12 | 49227930 | 49273328 | + | mRNA | nonsense_mediated_decay |
| -35908 | enst00000549818 | sg00000167553 | tuba1c-206 | 12 | 49227927 | 49269527 | + | mRNA | nonsense_mediated_decay |
| -35909 | enst00000541364 | sg00000167553 | tuba1c-202 | 12 | 49227926 | 49273334 | + | mRNA | protein_coding |
| -55289 | enst00000550574 | sg00000167553 | tuba1c-207 | 12 | 49208546 | 49256489 | + | lnc_RNA | processed_transcript |
| 57525 | enst00000549275 | sg00000135451 | troap-209 | 12 | 49323236 | 49324296 | + | mRNA | protein_coding |
| 57533 | enst00000551245 | sg00000135451 | troap-215 | 12 | 49323244 | 49331670 | + | mRNA | protein_coding |
| 57544 | enst00000548311 | sg00000135451 | troap-207 | 12 | 49323255 | 49324416 | + | mRNA | protein_coding |
| 57544 | enst00000549891 | sg00000135451 | troap-211 | 12 | 49323255 | 49329634 | + | mRNA | nonsense_mediated_decay |
| 57544 | enst00000257909 | sg00000135451 | troap-201 | 12 | 49323255 | 49331731 | + | mRNA | protein_coding |
| 57544 | enst00000380327 | sg00000135451 | troap-202 | 12 | 49323255 | 49324392 | + | mRNA | protein_coding |
| 57545 | enst00000550346 | sg00000135451 | troap-212 | 12 | 49323256 | 49327331 | + | mRNA | protein_coding |
| 57546 | enst00000550709 | sg00000135451 | troap-213 | 12 | 49323257 | 49324380 | + | mRNA | protein_coding |
| 57546 | enst00000546735 | sg00000135451 | troap-203 | 12 | 49323257 | 49329598 | + | mRNA | nonsense_mediated_decay |
| 57562 | enst00000549534 | sg00000135451 | troap-210 | 12 | 49323273 | 49324365 | + | mRNA | protein_coding |
| 57568 | enst00000546776 | sg00000135451 | troap-204 | 12 | 49323279 | 49329061 | + | mRNA | nonsense_mediated_decay |
| 57572 | enst00000551192 | sg00000135451 | troap-214 | 12 | 49323283 | 49329785 | + | mRNA | nonsense_mediated_decay |
| 57599 | enst00000547807 | sg00000135451 | troap-205 | 12 | 49323310 | 49327327 | + | mRNA | protein_coding |
| 57663 | enst00000551567 | sg00000135451 | troap-216 | 12 | 49323374 | 49325505 | + | mRNA | protein_coding |
| 58865 | enst00000553259 | sg00000258334 | ac125611.4-201 | 12 | 49292631 | 49324576 | - | lnc_RNA | lncrna |
| 59742 | enst00000548817 | sg00000135451 | troap-208 | 12 | 49325453 | 49326720 | + | lnc_RNA | retained_intron |
| 60930 | enst00000547923 | sg00000135451 | troap-206 | 12 | 49326641 | 49331708 | + | mRNA | protein_coding |
| -67051 | enst00000616942 | sg00000274017 | ac010173.2-201 | 12 | 49196784 | 49197062 | + | ncRNA | misc_rna |
| 71477 | enst00000334221 | sg00000186897 | c1ql4-201 | 12 | 49332409 | 49337188 | - | mRNA | protein_coding |
| -74755 | enst00000301071 | sg00000167552 | tuba1a-202 | 12 | 49184795 | 49189080 | - | mRNA | protein_coding |
| -74757 | enst00000552924 | sg00000167552 | tuba1a-209 | 12 | 49185925 | 49189078 | - | mRNA | protein_coding |
| -74769 | enst00000546918 | sg00000167552 | tuba1a-203 | 12 | 49185621 | 49189066 | - | mRNA | protein_coding |
| -74769 | enst00000547939 | sg00000167552 | tuba1a-204 | 12 | 49185602 | 49189066 | - | mRNA | protein_coding |
| -74834 | enst00000550254 | sg00000167552 | tuba1a-206 | 12 | 49186163 | 49189001 | - | lnc_RNA | retained_intron |
| -74852 | enst00000548363 | sg00000167552 | tuba1a-205 | 12 | 49186016 | 49188983 | - | lnc_RNA | retained_intron |
| -74936 | enst00000295766 | sg00000167552 | tuba1a-201 | 12 | 49184959 | 49188899 | - | mRNA | protein_coding |
| -75099 | enst00000549554 | sg00000167553 | tuba1c-205 | 12 | 49188736 | 49208901 | + | lnc_RNA | processed_transcript |
| -76377 | enst00000550811 | sg00000167552 | tuba1a-208 | 12 | 49186653 | 49187458 | - | mRNA | protein_coding |
| -76971 | enst00000550767 | sg00000167552 | tuba1a-207 | 12 | 49185010 | 49186864 | - | mRNA | protein_coding |
| 81177 | enst00000549441 | sg00000178401 | dnajc22-202 | 12 | 49346888 | 49353690 | + | mRNA | protein_coding |
| 81327 | enst00000395069 | sg00000178401 | dnajc22-201 | 12 | 49347038 | 49351914 | + | mRNA | protein_coding |
| 82297 | enst00000647553 | sg00000178401 | dnajc22-205 | 12 | 49348008 | 49353924 | + | mRNA | nonsense_mediated_decay |
| 85574 | enst00000551153 | sg00000178401 | dnajc22-203 | 12 | 49351285 | 49354142 | + | lnc_RNA | retained_intron |
| 85846 | enst00000552651 | sg00000178401 | dnajc22-204 | 12 | 49351557 | 49357546 | + | lnc_RNA | processed_transcript |
| 100873 | enst00000550997 | sg00000123352 | spats2-217 | 12 | 49366584 | 49494771 | + | mRNA | protein_coding |
| 101145 | enst00000549538 | sg00000123352 | spats2-215 | 12 | 49366856 | 49489559 | + | mRNA | protein_coding |
| 101194 | enst00000549412 | sg00000123352 | spats2-214 | 12 | 49366905 | 49526365 | + | mRNA | nonsense_mediated_decay |
| 101194 | enst00000550643 | sg00000123352 | spats2-216 | 12 | 49366905 | 49484668 | + | mRNA | protein_coding |
| 101194 | enst00000548654 | sg00000123352 | spats2-206 | 12 | 49366905 | 49461037 | + | mRNA | protein_coding |
| 101198 | enst00000548710 | sg00000123352 | spats2-207 | 12 | 49366909 | 49489561 | + | mRNA | protein_coding |
| 101218 | enst00000549179 | sg00000123352 | spats2-211 | 12 | 49366929 | 49461028 | + | mRNA | protein_coding |
| 101251 | enst00000548377 | sg00000123352 | spats2-204 | 12 | 49366962 | 49461037 | + | mRNA | protein_coding |
| 101673 | enst00000549298 | sg00000123352 | spats2-212 | 12 | 49367384 | 49484673 | + | mRNA | protein_coding |
| 101751 | enst00000549375 | sg00000123352 | spats2-213 | 12 | 49367462 | 49491159 | + | lnc_RNA | retained_intron |
| 101754 | enst00000553127 | sg00000123352 | spats2-223 | 12 | 49367465 | 49527424 | + | mRNA | protein_coding |
| 101764 | enst00000321898 | sg00000123352 | spats2-201 | 12 | 49367475 | 49527419 | + | mRNA | protein_coding |
| 101785 | enst00000551540 | sg00000123352 | spats2-218 | 12 | 49367496 | 49490691 | + | mRNA | protein_coding |
| 101799 | enst00000552918 | sg00000123352 | spats2-222 | 12 | 49367510 | 49527226 | + | mRNA | protein_coding |
| 101807 | enst00000548777 | sg00000123352 | spats2-209 | 12 | 49367518 | 49484663 | + | mRNA | protein_coding |
| 101836 | enst00000552171 | sg00000123352 | spats2-219 | 12 | 49367547 | 49484595 | + | mRNA | protein_coding |
| 101836 | enst00000547865 | sg00000123352 | spats2-203 | 12 | 49367547 | 49463625 | + | mRNA | protein_coding |
| 101836 | enst00000548388 | sg00000123352 | spats2-205 | 12 | 49367547 | 49461229 | + | lnc_RNA | retained_intron |
| -116593 | enst00000667827 | sg00000258017 | ac011603.3-209 | 12 | 49147242 | 49150076 | + | lnc_RNA | lncrna |
| 123805 | enst00000551907 | sg00000257954 | ac125611.2-201 | 12 | 49389516 | 49390162 | + | pseudogenic_transcript | processed_pseudogene |
| -130888 | enst00000363439 | sg00000200309 | ac011603.1-201 | 12 | 49132853 | 49132947 | - | ncRNA | misc_rna |
| -132125 | enst00000551496 | sg00000258017 | ac011603.3-205 | 12 | 49131710 | 49147865 | + | lnc_RNA | lncrna |
| -132229 | enst00000664160 | sg00000258017 | ac011603.3-208 | 12 | 49131606 | 49148464 | + | lnc_RNA | lncrna |
| -132438 | enst00000547476 | sg00000123416 | tuba1b-203 | 12 | 49129286 | 49131397 | - | mRNA | protein_coding |
| -132440 | enst00000550367 | sg00000123416 | tuba1b-206 | 12 | 49128454 | 49131395 | - | mRNA | protein_coding |
| -132440 | enst00000551324 | sg00000123416 | tuba1b-207 | 12 | 49128981 | 49131395 | - | lnc_RNA | retained_intron |
| -132440 | enst00000547765 | sg00000123416 | tuba1b-204 | 12 | 49127818 | 49131395 | - | mRNA | nonsense_mediated_decay |
| -132440 | enst00000336023 | sg00000123416 | tuba1b-202 | 12 | 49127782 | 49131395 | - | mRNA | protein_coding |
| -132440 | enst00000332858 | sg00000123416 | tuba1b-201 | 12 | 49127786 | 49131395 | - | lnc_RNA | retained_intron |
| -132440 | enst00000552984 | sg00000123416 | tuba1b-208 | 12 | 49129364 | 49131395 | - | mRNA | protein_coding |
| -132664 | enst00000547712 | sg00000258017 | ac011603.3-204 | 12 | 49131171 | 49147869 | + | lnc_RNA | lncrna |
| -132857 | enst00000665211 | sg00000258017 | ac011603.3-207 | 12 | 49130978 | 49148432 | + | lnc_RNA | lncrna |
| -132926 | enst00000656133 | sg00000258017 | ac011603.3-206 | 12 | 49130909 | 49188484 | + | lnc_RNA | lncrna |
| -133722 | enst00000549870 | sg00000123416 | tuba1b-205 | 12 | 49129268 | 49130113 | - | mRNA | protein_coding |
| -135824 | enst00000547387 | sg00000258017 | ac011603.3-203 | 12 | 49128011 | 49131362 | + | lnc_RNA | lncrna |
| -136049 | enst00000552893 | sg00000258017 | ac011603.3-202 | 12 | 49127786 | 49128708 | + | lnc_RNA | lncrna |
| -136053 | enst00000548149 | sg00000258017 | ac011603.3-201 | 12 | 49127782 | 49128879 | + | lnc_RNA | lncrna |
| -152935 | enst00000551535 | sg00000139636 | lmbr1l-221 | 12 | 49106589 | 49110900 | - | lnc_RNA | retained_intron |
| -152937 | enst00000267102 | sg00000139636 | lmbr1l-201 | 12 | 49096551 | 49110898 | - | mRNA | protein_coding |
| -152949 | enst00000551782 | sg00000139636 | lmbr1l-222 | 12 | 49104503 | 49110886 | - | mRNA | protein_coding |
| -152951 | enst00000551115 | sg00000139636 | lmbr1l-217 | 12 | 49106423 | 49110884 | - | lnc_RNA | retained_intron |
| -152958 | enst00000547670 | sg00000139636 | lmbr1l-205 | 12 | 49097700 | 49110877 | - | mRNA | nonsense_mediated_decay |
| -152964 | enst00000552153 | sg00000139636 | lmbr1l-225 | 12 | 49103687 | 49110871 | - | lnc_RNA | processed_transcript |
| -152985 | enst00000549296 | sg00000139636 | lmbr1l-210 | 12 | 49104499 | 49110850 | - | mRNA | nonsense_mediated_decay |
| -152985 | enst00000547382 | sg00000139636 | lmbr1l-204 | 12 | 49097142 | 49110850 | - | mRNA | protein_coding |
| -152985 | enst00000457164 | sg00000139636 | lmbr1l-203 | 12 | 49102353 | 49110850 | - | mRNA | nonsense_mediated_decay |
| -152988 | enst00000548983 | sg00000139636 | lmbr1l-209 | 12 | 49106691 | 49110847 | - | lnc_RNA | processed_transcript |
| -152990 | enst00000550137 | sg00000139636 | lmbr1l-214 | 12 | 49104470 | 49110845 | - | mRNA | protein_coding |
| -153142 | enst00000553204 | sg00000139636 | lmbr1l-230 | 12 | 49103701 | 49110693 | - | lnc_RNA | processed_transcript |
| -153154 | enst00000417750 | sg00000139636 | lmbr1l-202 | 12 | 49097136 | 49110681 | - | mRNA | nonsense_mediated_decay |
| -153158 | enst00000550815 | sg00000139636 | lmbr1l-215 | 12 | 49104751 | 49110677 | - | mRNA | nonsense_mediated_decay |
| -153160 | enst00000547675 | sg00000139636 | lmbr1l-206 | 12 | 49102476 | 49110675 | - | mRNA | protein_coding |
| -153168 | enst00000550867 | sg00000139636 | lmbr1l-216 | 12 | 49097158 | 49110667 | - | lnc_RNA | retained_intron |
| -153630 | enst00000551854 | sg00000139636 | lmbr1l-223 | 12 | 49104474 | 49110205 | - | mRNA | protein_coding |
| -156824 | enst00000551169 | sg00000139636 | lmbr1l-219 | 12 | 49103081 | 49107011 | - | mRNA | nonsense_mediated_decay |
| -157755 | enst00000549730 | sg00000139636 | lmbr1l-213 | 12 | 49103103 | 49106080 | - | lnc_RNA | retained_intron |
| -158603 | enst00000549587 | sg00000139636 | lmbr1l-212 | 12 | 49104494 | 49105232 | - | lnc_RNA | retained_intron |
| -159456 | enst00000552577 | sg00000139636 | lmbr1l-227 | 12 | 49097137 | 49104379 | - | lnc_RNA | retained_intron |
| -160057 | enst00000552141 | sg00000139636 | lmbr1l-224 | 12 | 49101920 | 49103778 | - | lnc_RNA | retained_intron |
| -160715 | enst00000552879 | sg00000139636 | lmbr1l-228 | 12 | 49101103 | 49103120 | - | lnc_RNA | retained_intron |
| -161492 | enst00000551143 | sg00000139636 | lmbr1l-218 | 12 | 49098002 | 49102343 | - | lnc_RNA | retained_intron |
| -161639 | enst00000553040 | sg00000139636 | lmbr1l-229 | 12 | 49097157 | 49102196 | - | mRNA | nonsense_mediated_decay |
| -161659 | enst00000552449 | sg00000139636 | lmbr1l-226 | 12 | 49100600 | 49102176 | - | mRNA | protein_coding |
| -162177 | enst00000547813 | sg00000139636 | lmbr1l-208 | 12 | 49097327 | 49101658 | - | lnc_RNA | retained_intron |
| -162286 | enst00000547698 | sg00000139636 | lmbr1l-207 | 12 | 49097145 | 49101549 | - | mRNA | protein_coding |
| -162334 | enst00000549429 | sg00000139636 | lmbr1l-211 | 12 | 49100759 | 49101501 | - | lnc_RNA | processed_transcript |
| -163103 | enst00000551272 | sg00000139636 | lmbr1l-220 | 12 | 49097674 | 49100732 | - | lnc_RNA | retained_intron |
| -169034 | enst00000649637 | sg00000139549 | dhh-201 | 12 | 49086656 | 49094801 | - | mRNA | protein_coding |
| -171627 | enst00000548030 | sg00000257346 | ac011603.2-202 | 12 | 49092208 | 49093312 | + | lnc_RNA | lncrna |
| -173627 | enst00000553174 | sg00000257346 | ac011603.2-201 | 12 | 49090208 | 49093201 | + | lnc_RNA | lncrna |
| 176941 | enst00000549563 | sg00000257464 | ac125611.1-201 | 12 | 49442424 | 49442652 | - | pseudogenic_transcript | processed_pseudogene |
| -188796 | enst00000611325 | sg00000277672 | ac011603.5-201 | 12 | 49075039 | 49075802 | + | pseudogenic_transcript | processed_pseudogene |
| -193810 | enst00000550797 | sg00000167550 | rhebl1-204 | 12 | 49064702 | 49070025 | - | mRNA | nonsense_mediated_decay |
| -193856 | enst00000301068 | sg00000167550 | rhebl1-201 | 12 | 49064676 | 49069979 | - | mRNA | protein_coding |
| -193888 | enst00000420065 | sg00000167550 | rhebl1-202 | 12 | 49064686 | 49069947 | - | mRNA | nonsense_mediated_decay |
| -193998 | enst00000550675 | sg00000167550 | rhebl1-203 | 12 | 49066492 | 49069837 | - | mRNA | protein_coding |
| 195168 | enst00000549045 | sg00000123352 | spats2-210 | 12 | 49460879 | 49494944 | + | mRNA | nonsense_mediated_decay |
| -204061 | enst00000547610 | sg00000167548 | kmt2d-203 | 12 | 49054380 | 49059774 | - | mRNA | protein_coding |
| -208511 | enst00000301067 | sg00000167548 | kmt2d-201 | 12 | 49018975 | 49055324 | - | mRNA | protein_coding |
| -219313 | enst00000650290 | sg00000167548 | kmt2d-208 | 12 | 49043635 | 49044522 | - | mRNA | protein_coding |
| -220137 | enst00000550356 | sg00000167548 | kmt2d-206 | 12 | 49043078 | 49043698 | - | lnc_RNA | retained_intron |
| 224404 | enst00000552557 | sg00000123352 | spats2-220 | 12 | 49490115 | 49514613 | + | lnc_RNA | processed_transcript |
| 224411 | enst00000552655 | sg00000123352 | spats2-221 | 12 | 49490122 | 49496889 | + | lnc_RNA | processed_transcript |
| -224536 | enst00000549799 | sg00000167548 | kmt2d-205 | 12 | 49038468 | 49039299 | - | lnc_RNA | processed_transcript |
| -226539 | enst00000549743 | sg00000167548 | kmt2d-204 | 12 | 49035575 | 49037296 | - | lnc_RNA | processed_transcript |
| -232431 | enst00000552391 | sg00000167548 | kmt2d-207 | 12 | 49030280 | 49031404 | - | lnc_RNA | retained_intron |
| -239211 | enst00000526209 | sg00000167548 | kmt2d-202 | 12 | 49021578 | 49024624 | - | mRNA | protein_coding |
| -245028 | enst00000547082 | sg00000181929 | prkag1-203 | 12 | 49005311 | 49018807 | - | mRNA | protein_coding |
| -245048 | enst00000546531 | sg00000181929 | prkag1-202 | 12 | 49002312 | 49018787 | - | mRNA | nonsense_mediated_decay |
| -245049 | enst00000552657 | sg00000181929 | prkag1-219 | 12 | 49012613 | 49018786 | - | lnc_RNA | retained_intron |
| -245056 | enst00000316299 | sg00000181929 | prkag1-201 | 12 | 49002278 | 49018779 | - | mRNA | protein_coding |
| -245058 | enst00000551696 | sg00000181929 | prkag1-215 | 12 | 49002969 | 49018777 | - | mRNA | protein_coding |
| -245059 | enst00000548065 | sg00000181929 | prkag1-206 | 12 | 49002274 | 49018776 | - | mRNA | protein_coding |
| -245060 | enst00000550125 | sg00000181929 | prkag1-212 | 12 | 49003757 | 49018775 | - | lnc_RNA | retained_intron |
| -245060 | enst00000548857 | sg00000181929 | prkag1-209 | 12 | 49005131 | 49018775 | - | mRNA | protein_coding |
| -245071 | enst00000550448 | sg00000181929 | prkag1-213 | 12 | 49004224 | 49018764 | - | lnc_RNA | retained_intron |
| -245071 | enst00000547306 | sg00000181929 | prkag1-205 | 12 | 49002278 | 49018764 | - | mRNA | protein_coding |
| -245071 | enst00000549726 | sg00000181929 | prkag1-211 | 12 | 49003810 | 49018764 | - | lnc_RNA | retained_intron |
| -245078 | enst00000547125 | sg00000181929 | prkag1-204 | 12 | 49005795 | 49018757 | - | mRNA | protein_coding |
| -245085 | enst00000548950 | sg00000181929 | prkag1-210 | 12 | 49003772 | 49018750 | - | mRNA | protein_coding |
| -245087 | enst00000548605 | sg00000181929 | prkag1-208 | 12 | 49005138 | 49018748 | - | mRNA | protein_coding |
| -245087 | enst00000552212 | sg00000181929 | prkag1-217 | 12 | 49002614 | 49018748 | - | mRNA | protein_coding |
| -245092 | enst00000551121 | sg00000181929 | prkag1-214 | 12 | 49003880 | 49018743 | - | mRNA | protein_coding |
| -245420 | enst00000552463 | sg00000181929 | prkag1-218 | 12 | 49004572 | 49018415 | - | mRNA | protein_coding |
| 248731 | enst00000548727 | sg00000123352 | spats2-208 | 12 | 49514442 | 49522853 | + | lnc_RNA | retained_intron |
| 257038 | enst00000547003 | sg00000123352 | spats2-202 | 12 | 49522749 | 49526198 | + | lnc_RNA | processed_transcript |
| -258000 | enst00000551770 | sg00000181929 | prkag1-216 | 12 | 49002640 | 49005835 | - | mRNA | protein_coding |
| -258006 | enst00000552793 | sg00000181929 | prkag1-220 | 12 | 49003762 | 49005829 | - | lnc_RNA | retained_intron |
| -260242 | enst00000548362 | sg00000181929 | prkag1-207 | 12 | 49002274 | 49003593 | - | mRNA | protein_coding |
| -264460 | enst00000421952 | sg00000181418 | ddn-201 | 12 | 48995149 | 48999375 | - | mRNA | protein_coding |
| -265437 | enst00000547395 | sg00000257913 | ddn-as1-201 | 12 | 48998398 | 49018719 | + | lnc_RNA | lncrna |
| -265458 | enst00000552284 | sg00000257913 | ddn-as1-203 | 12 | 48998377 | 49018780 | + | lnc_RNA | lncrna |
| -265463 | enst00000547866 | sg00000257913 | ddn-as1-202 | 12 | 48998372 | 49019197 | + | lnc_RNA | lncrna |
| -265468 | enst00000552933 | sg00000257913 | ddn-as1-204 | 12 | 48998367 | 49019235 | + | lnc_RNA | lncrna |
| -268685 | enst00000549516 | sg00000258283 | ac011603.4-201 | 12 | 48995150 | 48996334 | + | lnc_RNA | lncrna |
| 273183 | enst00000664527 | sg00000287537 | ac020612.4-201 | 12 | 49536677 | 49538894 | - | lnc_RNA | lncrna |
| 273319 | enst00000257981 | sg00000135519 | kcnh3-201 | 12 | 49539030 | 49558337 | + | mRNA | protein_coding |
| 273446 | enst00000649994 | sg00000135519 | kcnh3-205 | 12 | 49539157 | 49558253 | + | mRNA | nonsense_mediated_decay |
| 275383 | enst00000550434 | sg00000135519 | kcnh3-203 | 12 | 49541094 | 49543878 | + | lnc_RNA | processed_transcript |
| 278543 | enst00000551415 | sg00000135519 | kcnh3-204 | 12 | 49544254 | 49546240 | + | lnc_RNA | processed_transcript |
| -285382 | enst00000613114 | sg00000125084 | wnt1-202 | 12 | 48978453 | 48981640 | + | mRNA | protein_coding |
| -285513 | enst00000293549 | sg00000125084 | wnt1-201 | 12 | 48978322 | 48982620 | + | mRNA | protein_coding |
| -288292 | enst00000363433 | sg00000200303 | rnu6-940p-201 | 12 | 48975543 | 48975646 | + | snRNA | snrna |
| 290461 | enst00000548675 | sg00000135519 | kcnh3-202 | 12 | 49556172 | 49557637 | + | lnc_RNA | retained_intron |
| -292100 | enst00000301061 | sg00000169884 | wnt10b-201 | 12 | 48965340 | 48971735 | - | mRNA | protein_coding |
| -292117 | enst00000403957 | sg00000169884 | wnt10b-202 | 12 | 48965556 | 48971718 | - | mRNA | protein_coding |
| -292337 | enst00000407467 | sg00000169884 | wnt10b-203 | 12 | 48965405 | 48971498 | - | mRNA | protein_coding |
| -292946 | enst00000420388 | sg00000169884 | wnt10b-205 | 12 | 48970120 | 48970889 | - | mRNA | protein_coding |
| -293079 | enst00000413630 | sg00000169884 | wnt10b-204 | 12 | 48968296 | 48970756 | - | mRNA | protein_coding |
| -293183 | enst00000475740 | sg00000169884 | wnt10b-206 | 12 | 48970120 | 48970652 | - | lnc_RNA | retained_intron |
| 293549 | enst00000552596 | sg00000187778 | mcrs1-215 | 12 | 49558479 | 49559260 | - | lnc_RNA | retained_intron |
| 294069 | enst00000548646 | sg00000187778 | mcrs1-208 | 12 | 49558504 | 49559780 | - | mRNA | nonsense_mediated_decay |
| 294591 | enst00000551598 | sg00000187778 | mcrs1-212 | 12 | 49556544 | 49560302 | - | mRNA | protein_coding |
| 297364 | enst00000547182 | sg00000187778 | mcrs1-204 | 12 | 49558573 | 49563075 | - | lnc_RNA | processed_transcript |
| 300728 | enst00000357123 | sg00000187778 | mcrs1-202 | 12 | 49558643 | 49566439 | - | mRNA | protein_coding |
| 302039 | enst00000551625 | sg00000187778 | mcrs1-213 | 12 | 49558302 | 49567750 | - | lnc_RNA | retained_intron |
| 302121 | enst00000548334 | sg00000187778 | mcrs1-205 | 12 | 49563487 | 49567832 | - | mRNA | protein_coding |
| 302139 | enst00000549528 | sg00000187778 | mcrs1-210 | 12 | 49564763 | 49567850 | - | mRNA | protein_coding |
| 302162 | enst00000548596 | sg00000187778 | mcrs1-206 | 12 | 49564481 | 49567873 | - | mRNA | protein_coding |
| 302389 | enst00000553173 | sg00000187778 | mcrs1-216 | 12 | 49559738 | 49568100 | - | mRNA | protein_coding |
| 302390 | enst00000550165 | sg00000187778 | mcrs1-211 | 12 | 49558363 | 49568101 | - | mRNA | protein_coding |
| 302417 | enst00000552206 | sg00000187778 | mcrs1-214 | 12 | 49565530 | 49568128 | - | lnc_RNA | retained_intron |
| 302420 | enst00000548602 | sg00000187778 | mcrs1-207 | 12 | 49558301 | 49568131 | - | mRNA | nonsense_mediated_decay |
| 302421 | enst00000549000 | sg00000187778 | mcrs1-209 | 12 | 49559013 | 49568132 | - | lnc_RNA | retained_intron |
| 302431 | enst00000343810 | sg00000187778 | mcrs1-201 | 12 | 49558299 | 49568142 | - | mRNA | protein_coding |
| 302434 | enst00000546244 | sg00000187778 | mcrs1-203 | 12 | 49558295 | 49568145 | - | mRNA | protein_coding |
| 302507 | enst00000552301 | sg00000110844 | prpf40b-216 | 12 | 49568218 | 49583264 | + | lnc_RNA | processed_transcript |
| 302525 | enst00000547764 | sg00000110844 | prpf40b-206 | 12 | 49568236 | 49600142 | + | lnc_RNA | processed_transcript |
| 302661 | enst00000551063 | sg00000110844 | prpf40b-211 | 12 | 49568372 | 49630625 | + | mRNA | protein_coding |
| -306348 | enst00000256682 | sg00000134287 | arf3-201 | 12 | 48935723 | 48957487 | - | mRNA | protein_coding |
| -306358 | enst00000447318 | sg00000134287 | arf3-202 | 12 | 48938554 | 48957477 | - | mRNA | protein_coding |
| -306373 | enst00000536283 | sg00000134287 | arf3-205 | 12 | 48956152 | 48957462 | - | lnc_RNA | processed_transcript |
| -306390 | enst00000485410 | sg00000134287 | arf3-204 | 12 | 48938421 | 48957445 | - | lnc_RNA | processed_transcript |
| -306390 | enst00000541959 | sg00000134287 | arf3-208 | 12 | 48938925 | 48957445 | - | mRNA | protein_coding |
| -306457 | enst00000539611 | sg00000134287 | arf3-206 | 12 | 48940104 | 48957378 | - | mRNA | protein_coding |
| -306470 | enst00000398092 | sg00000272822 | ac073610.2-201 | 12 | 48903503 | 48957365 | - | mRNA | protein_coding |
| -306630 | enst00000541967 | sg00000134287 | arf3-209 | 12 | 48941094 | 48957205 | - | lnc_RNA | processed_transcript |
| -306766 | enst00000541236 | sg00000134287 | arf3-207 | 12 | 48939732 | 48957069 | - | mRNA | protein_coding |
| -307343 | enst00000472621 | sg00000134287 | arf3-203 | 12 | 48941124 | 48956492 | - | lnc_RNA | processed_transcript |
| -307395 | enst00000545855 | sg00000134287 | arf3-210 | 12 | 48940975 | 48956440 | - | mRNA | protein_coding |
| 311794 | enst00000550644 | sg00000257964 | ac020612.3-201 | 12 | 49576840 | 49577505 | - | lnc_RNA | lncrna |
| 317850 | enst00000527253 | sg00000110844 | prpf40b-204 | 12 | 49583561 | 49604731 | + | lnc_RNA | processed_transcript |
| -324172 | enst00000537495 | sg00000272822 | ac073610.2-202 | 12 | 48921963 | 48939663 | - | mRNA | protein_coding |
| 327393 | enst00000362367 | sg00000199237 | rnu6-834p-201 | 12 | 49593104 | 49593213 | + | snRNA | snrna |
| 328380 | enst00000553226 | sg00000258284 | polr2kp1-201 | 12 | 49594091 | 49594258 | + | pseudogenic_transcript | processed_pseudogene |
| 329437 | enst00000547655 | sg00000257243 | ac020612.1-201 | 12 | 49595148 | 49595688 | + | pseudogenic_transcript | processed_pseudogene |
| 333078 | enst00000548841 | sg00000135436 | fam186b-204 | 12 | 49582885 | 49598789 | - | mRNA | protein_coding |
| 334115 | enst00000508736 | sg00000110844 | prpf40b-203 | 12 | 49599826 | 49604719 | + | lnc_RNA | processed_transcript |
| 334767 | enst00000532262 | sg00000135436 | fam186b-202 | 12 | 49584278 | 49600478 | - | mRNA | protein_coding |
| -337361 | enst00000553027 | sg00000134285 | fkbp11-213 | 12 | 48921518 | 48926474 | - | lnc_RNA | retained_intron |
| -338315 | enst00000453172 | sg00000134285 | fkbp11-203 | 12 | 48923126 | 48925520 | - | mRNA | protein_coding |
| -338324 | enst00000552878 | sg00000134285 | fkbp11-212 | 12 | 48922565 | 48925511 | - | mRNA | protein_coding |
| -338325 | enst00000551694 | sg00000134285 | fkbp11-210 | 12 | 48921961 | 48925510 | - | lnc_RNA | retained_intron |
| -338325 | enst00000551807 | sg00000134285 | fkbp11-211 | 12 | 48924826 | 48925510 | - | lnc_RNA | retained_intron |
| -338343 | enst00000550765 | sg00000134285 | fkbp11-208 | 12 | 48921963 | 48925492 | - | mRNA | protein_coding |
| -338343 | enst00000547789 | sg00000134285 | fkbp11-206 | 12 | 48923763 | 48925492 | - | mRNA | nonsense_mediated_decay |
| -338350 | enst00000256680 | sg00000134285 | fkbp11-201 | 12 | 48921977 | 48925485 | - | mRNA | nonsense_mediated_decay |
| -338679 | enst00000549084 | sg00000134285 | fkbp11-207 | 12 | 48923939 | 48925156 | - | lnc_RNA | retained_intron |
| -338868 | enst00000444214 | sg00000134285 | fkbp11-202 | 12 | 48921959 | 48924967 | - | mRNA | protein_coding |
| -339047 | enst00000546671 | sg00000134285 | fkbp11-204 | 12 | 48923242 | 48924788 | - | lnc_RNA | retained_intron |
| -339106 | enst00000551094 | sg00000134285 | fkbp11-209 | 12 | 48921959 | 48924729 | - | lnc_RNA | retained_intron |
| -339220 | enst00000546847 | sg00000134285 | fkbp11-205 | 12 | 48921960 | 48924615 | - | mRNA | nonsense_mediated_decay |
| 339907 | enst00000551047 | sg00000135436 | fam186b-205 | 12 | 49583208 | 49605618 | - | mRNA | protein_coding |
| 339916 | enst00000533372 | sg00000135436 | fam186b-203 | 12 | 49582886 | 49605627 | - | mRNA | nonsense_mediated_decay |
| 339928 | enst00000257894 | sg00000135436 | fam186b-201 | 12 | 49587505 | 49605639 | - | mRNA | protein_coding |
| -345691 | enst00000552188 | sg00000139537 | ccdc65-204 | 12 | 48918144 | 48920963 | + | lnc_RNA | retained_intron |
| 353623 | enst00000550710 | sg00000258104 | higd1ap9-201 | 12 | 49619334 | 49619612 | + | pseudogenic_transcript | processed_pseudogene |
| 357703 | enst00000551418 | sg00000110844 | prpf40b-215 | 12 | 49623414 | 49632037 | + | lnc_RNA | retained_intron |
| 357725 | enst00000548825 | sg00000110844 | prpf40b-209 | 12 | 49623436 | 49644665 | + | mRNA | protein_coding |
| 357859 | enst00000548436 | sg00000110844 | prpf40b-208 | 12 | 49623570 | 49634819 | + | lnc_RNA | retained_intron |
| 357909 | enst00000261897 | sg00000110844 | prpf40b-201 | 12 | 49623620 | 49644666 | + | mRNA | protein_coding |
| -359702 | enst00000320516 | sg00000139537 | ccdc65-202 | 12 | 48904133 | 48921576 | + | mRNA | protein_coding |
| -359702 | enst00000547861 | sg00000139537 | ccdc65-203 | 12 | 48904133 | 48921570 | + | mRNA | nonsense_mediated_decay |
| -359716 | enst00000552942 | sg00000139537 | ccdc65-205 | 12 | 48904119 | 48921417 | + | mRNA | protein_coding |
| -359725 | enst00000266984 | sg00000139537 | ccdc65-201 | 12 | 48904110 | 48931840 | + | mRNA | protein_coding |
| -360022 | enst00000489971 | sg00000239617 | ac073610.1-201 | 12 | 48903418 | 48903813 | - | pseudogenic_transcript | processed_pseudogene |
| 364833 | enst00000551111 | sg00000110844 | prpf40b-212 | 12 | 49630544 | 49633817 | + | lnc_RNA | retained_intron |
| 364833 | enst00000380281 | sg00000110844 | prpf40b-202 | 12 | 49630544 | 49644666 | + | mRNA | protein_coding |
| 367018 | enst00000551320 | sg00000110844 | prpf40b-214 | 12 | 49632729 | 49633931 | + | lnc_RNA | retained_intron |
| -371607 | enst00000362524 | sg00000199394 | rnu6-600p-201 | 12 | 48892130 | 48892228 | - | snRNA | snrna |
| 371846 | enst00000548399 | sg00000110844 | prpf40b-207 | 12 | 49637557 | 49642304 | + | lnc_RNA | retained_intron |
| 372108 | enst00000549547 | sg00000110844 | prpf40b-210 | 12 | 49637819 | 49643914 | + | mRNA | nonsense_mediated_decay |
| 373432 | enst00000550668 | sg00000161791 | fmnl3-206 | 12 | 49637942 | 49639143 | - | lnc_RNA | processed_transcript |
| 376235 | enst00000546626 | sg00000110844 | prpf40b-205 | 12 | 49641946 | 49643245 | + | lnc_RNA | retained_intron |
| 376924 | enst00000551269 | sg00000110844 | prpf40b-213 | 12 | 49642635 | 49643811 | + | lnc_RNA | retained_intron |
| 386531 | enst00000549137 | sg00000161791 | fmnl3-203 | 12 | 49644953 | 49652242 | - | lnc_RNA | retained_intron |
| -397965 | enst00000649147 | sg00000172602 | rnd1-206 | 12 | 48857686 | 48865870 | - | lnc_RNA | retained_intron |
| -397965 | enst00000309739 | sg00000172602 | rnd1-201 | 12 | 48857145 | 48865870 | - | mRNA | protein_coding |
| -397980 | enst00000551243 | sg00000172602 | rnd1-204 | 12 | 48861030 | 48865855 | - | mRNA | nonsense_mediated_decay |
| -401625 | enst00000553260 | sg00000172602 | rnd1-205 | 12 | 48858097 | 48862210 | - | lnc_RNA | retained_intron |
| -402704 | enst00000550607 | sg00000172602 | rnd1-203 | 12 | 48857145 | 48861131 | - | mRNA | protein_coding |
| 402843 | enst00000550970 | sg00000161791 | fmnl3-207 | 12 | 49661735 | 49668554 | - | lnc_RNA | retained_intron |
| -404553 | enst00000548445 | sg00000172602 | rnd1-202 | 12 | 48857147 | 48859282 | - | lnc_RNA | retained_intron |
| -410993 | enst00000552555 | sg00000174243 | ddx23-215 | 12 | 48840129 | 48852842 | - | lnc_RNA | processed_transcript |
| -411672 | enst00000308025 | sg00000174243 | ddx23-201 | 12 | 48829756 | 48852163 | - | mRNA | protein_coding |
| -411694 | enst00000552369 | sg00000174243 | ddx23-213 | 12 | 48839487 | 48852141 | - | lnc_RNA | processed_transcript |
| -411694 | enst00000552512 | sg00000174243 | ddx23-214 | 12 | 48838015 | 48852141 | - | mRNA | protein_coding |
| -411694 | enst00000553182 | sg00000174243 | ddx23-218 | 12 | 48837292 | 48852141 | - | lnc_RNA | processed_transcript |
| -411694 | enst00000547135 | sg00000174243 | ddx23-202 | 12 | 48834458 | 48852141 | - | mRNA | nonsense_mediated_decay |
| -411694 | enst00000551468 | sg00000174243 | ddx23-211 | 12 | 48840013 | 48852141 | - | mRNA | protein_coding |
| -411697 | enst00000551098 | sg00000174243 | ddx23-208 | 12 | 48837533 | 48852138 | - | lnc_RNA | retained_intron |
| -423980 | enst00000550834 | sg00000174243 | ddx23-207 | 12 | 48830057 | 48839855 | - | mRNA | protein_coding |
| -425774 | enst00000547165 | sg00000174243 | ddx23-203 | 12 | 48836176 | 48838061 | - | lnc_RNA | retained_intron |
| -426135 | enst00000551189 | sg00000174243 | ddx23-209 | 12 | 48836772 | 48837700 | - | lnc_RNA | retained_intron |
| -426503 | enst00000552069 | sg00000174243 | ddx23-212 | 12 | 48836642 | 48837332 | - | lnc_RNA | retained_intron |
| -427155 | enst00000552802 | sg00000174243 | ddx23-216 | 12 | 48832422 | 48836680 | - | mRNA | nonsense_mediated_decay |
| -429075 | enst00000547290 | sg00000174243 | ddx23-204 | 12 | 48832508 | 48834760 | - | lnc_RNA | retained_intron |
| -430274 | enst00000553065 | sg00000174243 | ddx23-217 | 12 | 48832523 | 48833561 | - | lnc_RNA | retained_intron |
| -430490 | enst00000549795 | sg00000174243 | ddx23-206 | 12 | 48831829 | 48833345 | - | lnc_RNA | retained_intron |
| -430920 | enst00000551331 | sg00000174243 | ddx23-210 | 12 | 48831214 | 48832915 | - | lnc_RNA | retained_intron |
| -431015 | enst00000547842 | sg00000174243 | ddx23-205 | 12 | 48832003 | 48832820 | - | lnc_RNA | retained_intron |
| -438720 | enst00000552480 | sg00000167535 | cacnb3-223 | 12 | 48825115 | 48827868 | + | lnc_RNA | retained_intron |
| -440056 | enst00000550483 | sg00000167535 | cacnb3-217 | 12 | 48823779 | 48826518 | + | mRNA | nonsense_mediated_decay |
| -440389 | enst00000550190 | sg00000167535 | cacnb3-215 | 12 | 48823446 | 48828941 | + | mRNA | protein_coding |
| 441509 | enst00000550488 | sg00000161791 | fmnl3-205 | 12 | 49644931 | 49707220 | - | mRNA | protein_coding |
| 441682 | enst00000352151 | sg00000161791 | fmnl3-202 | 12 | 49644953 | 49707393 | - | mRNA | protein_coding |
| 441694 | enst00000335154 | sg00000161791 | fmnl3-201 | 12 | 49636499 | 49707405 | - | mRNA | protein_coding |
| 442014 | enst00000548809 | sg00000139644 | tmbim6-214 | 12 | 49707725 | 49752526 | + | mRNA | protein_coding |
| 442022 | enst00000548589 | sg00000139644 | tmbim6-212 | 12 | 49707733 | 49715777 | + | lnc_RNA | processed_transcript |
| 442022 | enst00000551154 | sg00000139644 | tmbim6-224 | 12 | 49707733 | 49753039 | + | mRNA | protein_coding |
| 442454 | enst00000550424 | sg00000161791 | fmnl3-204 | 12 | 49666159 | 49708165 | - | mRNA | protein_coding |
| 443526 | enst00000549485 | sg00000257570 | ac020612.2-201 | 12 | 49709237 | 49709336 | + | pseudogenic_transcript | processed_pseudogene |
| -444057 | enst00000552812 | sg00000167535 | cacnb3-224 | 12 | 48819778 | 48821489 | + | lnc_RNA | retained_intron |
| -444926 | enst00000551544 | sg00000167535 | cacnb3-219 | 12 | 48818909 | 48828941 | + | mRNA | nonsense_mediated_decay |
| -444926 | enst00000547230 | sg00000167535 | cacnb3-204 | 12 | 48818909 | 48828941 | + | mRNA | protein_coding |
| -445042 | enst00000550771 | sg00000167535 | cacnb3-218 | 12 | 48818793 | 48823961 | + | lnc_RNA | retained_intron |
| -445048 | enst00000548279 | sg00000167535 | cacnb3-208 | 12 | 48818787 | 48824697 | + | mRNA | protein_coding |
| -445331 | enst00000547392 | sg00000167535 | cacnb3-205 | 12 | 48818504 | 48828336 | + | mRNA | protein_coding |
| -445339 | enst00000301050 | sg00000167535 | cacnb3-201 | 12 | 48818496 | 48828941 | + | mRNA | protein_coding |
| -445351 | enst00000547818 | sg00000167535 | cacnb3-207 | 12 | 48818484 | 48826518 | + | mRNA | protein_coding |
| -445429 | enst00000549971 | sg00000167535 | cacnb3-212 | 12 | 48818406 | 48824312 | + | lnc_RNA | processed_transcript |
| -445449 | enst00000552022 | sg00000167535 | cacnb3-221 | 12 | 48818386 | 48824733 | + | lnc_RNA | processed_transcript |
| -445969 | enst00000550064 | sg00000167535 | cacnb3-213 | 12 | 48817866 | 48825720 | + | mRNA | protein_coding |
| -448223 | enst00000552465 | sg00000167535 | cacnb3-222 | 12 | 48815612 | 48817312 | + | lnc_RNA | retained_intron |
| -448233 | enst00000550168 | sg00000167535 | cacnb3-214 | 12 | 48815602 | 48824733 | + | lnc_RNA | processed_transcript |
| -448235 | enst00000551716 | sg00000167535 | cacnb3-220 | 12 | 48815600 | 48823972 | + | lnc_RNA | retained_intron |
| -448244 | enst00000548874 | sg00000167535 | cacnb3-210 | 12 | 48815591 | 48825484 | + | mRNA | nonsense_mediated_decay |
| -448248 | enst00000536187 | sg00000167535 | cacnb3-202 | 12 | 48815587 | 48828219 | + | mRNA | protein_coding |
| -448942 | enst00000548860 | sg00000167535 | cacnb3-209 | 12 | 48814893 | 48828941 | + | lnc_RNA | retained_intron |
| -449355 | enst00000549226 | sg00000167535 | cacnb3-211 | 12 | 48814480 | 48825161 | + | lnc_RNA | retained_intron |
| -449384 | enst00000540990 | sg00000167535 | cacnb3-203 | 12 | 48814451 | 48828200 | + | mRNA | protein_coding |
| -449403 | enst00000550391 | sg00000167535 | cacnb3-216 | 12 | 48814432 | 48825724 | + | mRNA | nonsense_mediated_decay |
| -450041 | enst00000547693 | sg00000167535 | cacnb3-206 | 12 | 48813794 | 48823984 | + | lnc_RNA | retained_intron |
| -453924 | enst00000384736 | sg00000207467 | ac117498.1-201 | 12 | 48809911 | 48810016 | + | ncRNA | misc_rna |
| -462749 | enst00000605409 | sg00000271547 | ac117498.3-201 | 12 | 48800576 | 48801086 | - | pseudogenic_transcript | processed_pseudogene |
| 473282 | enst00000546796 | sg00000139644 | tmbim6-204 | 12 | 49738993 | 49758483 | + | mRNA | protein_coding |
| -474259 | enst00000549864 | sg00000257660 | adcy6-dt-202 | 12 | 48789576 | 48790535 | + | lnc_RNA | lncrna |
| -474688 | enst00000547774 | sg00000257660 | adcy6-dt-201 | 12 | 48789147 | 48790535 | + | lnc_RNA | lncrna |
| -474798 | enst00000550422 | sg00000174233 | adcy6-206 | 12 | 48766198 | 48789037 | - | mRNA | protein_coding |
| 475833 | enst00000549966 | sg00000139644 | tmbim6-220 | 12 | 49741544 | 49758265 | + | mRNA | protein_coding |
| 475836 | enst00000547832 | sg00000139644 | tmbim6-210 | 12 | 49741547 | 49758462 | + | mRNA | protein_coding |
| 475838 | enst00000547187 | sg00000139644 | tmbim6-208 | 12 | 49741549 | 49755756 | + | mRNA | protein_coding |
| 475846 | enst00000552635 | sg00000139644 | tmbim6-226 | 12 | 49741557 | 49758707 | + | mRNA | nonsense_mediated_decay |
| 475846 | enst00000546914 | sg00000139644 | tmbim6-206 | 12 | 49741557 | 49755756 | + | mRNA | protein_coding |
| 475846 | enst00000548894 | sg00000139644 | tmbim6-215 | 12 | 49741557 | 49752542 | + | mRNA | protein_coding |
| 475846 | enst00000552699 | sg00000139644 | tmbim6-227 | 12 | 49741557 | 49764737 | + | mRNA | protein_coding |
| 475846 | enst00000267115 | sg00000139644 | tmbim6-201 | 12 | 49741557 | 49764934 | + | mRNA | protein_coding |
| 475857 | enst00000549445 | sg00000139644 | tmbim6-218 | 12 | 49741568 | 49755756 | + | mRNA | protein_coding |
| 475860 | enst00000546885 | sg00000139644 | tmbim6-205 | 12 | 49741571 | 49742488 | + | lnc_RNA | retained_intron |
| 475860 | enst00000550951 | sg00000139644 | tmbim6-223 | 12 | 49741571 | 49753049 | + | mRNA | protein_coding |
| 475863 | enst00000549385 | sg00000139644 | tmbim6-217 | 12 | 49741574 | 49764726 | + | mRNA | protein_coding |
| 475897 | enst00000548201 | sg00000139644 | tmbim6-211 | 12 | 49741608 | 49758438 | + | mRNA | protein_coding |
| 475897 | enst00000548713 | sg00000139644 | tmbim6-213 | 12 | 49741608 | 49752524 | + | mRNA | protein_coding |
| 476098 | enst00000423828 | sg00000139644 | tmbim6-203 | 12 | 49741809 | 49764934 | + | mRNA | protein_coding |
| 476111 | enst00000550445 | sg00000139644 | tmbim6-222 | 12 | 49741822 | 49758686 | + | mRNA | protein_coding |
| 477706 | enst00000549130 | sg00000139644 | tmbim6-216 | 12 | 49743417 | 49755736 | + | mRNA | protein_coding |
| -479706 | enst00000307885 | sg00000174233 | adcy6-201 | 12 | 48766329 | 48784129 | - | mRNA | protein_coding |
| -480394 | enst00000357869 | sg00000174233 | adcy6-202 | 12 | 48766198 | 48783441 | - | mRNA | protein_coding |
| 484909 | enst00000552370 | sg00000139644 | tmbim6-225 | 12 | 49750620 | 49762948 | + | mRNA | protein_coding |
| -485411 | enst00000548820 | sg00000174233 | adcy6-205 | 12 | 48777672 | 48778424 | - | mRNA | protein_coding |
| -485650 | enst00000551435 | sg00000174233 | adcy6-207 | 12 | 48776294 | 48778185 | - | lnc_RNA | retained_intron |
| 486745 | enst00000395006 | sg00000139644 | tmbim6-202 | 12 | 49752456 | 49764742 | + | mRNA | protein_coding |
| 487253 | enst00000547798 | sg00000139644 | tmbim6-209 | 12 | 49752964 | 49764723 | + | mRNA | protein_coding |
| 487327 | enst00000553022 | sg00000139644 | tmbim6-228 | 12 | 49753038 | 49758708 | + | lnc_RNA | retained_intron |
| -487351 | enst00000552090 | sg00000174233 | adcy6-208 | 12 | 48773943 | 48776484 | - | lnc_RNA | processed_transcript |
| -489081 | enst00000552099 | sg00000174233 | adcy6-209 | 12 | 48771257 | 48774754 | - | lnc_RNA | retained_intron |
| -489339 | enst00000547260 | sg00000174233 | adcy6-203 | 12 | 48766194 | 48774496 | - | lnc_RNA | retained_intron |
| -489811 | enst00000548351 | sg00000174233 | adcy6-204 | 12 | 48771743 | 48774024 | - | lnc_RNA | processed_transcript |
| -491798 | enst00000583094 | sg00000264201 | mir4701-201 | 12 | 48771975 | 48772037 | - | miRNA | mirna |
| 492496 | enst00000547013 | sg00000139644 | tmbim6-207 | 12 | 49758207 | 49761783 | + | lnc_RNA | retained_intron |
| 493093 | enst00000550040 | sg00000139644 | tmbim6-221 | 12 | 49758804 | 49762137 | + | lnc_RNA | retained_intron |
| 493425 | enst00000549471 | sg00000139644 | tmbim6-219 | 12 | 49759136 | 49763094 | + | lnc_RNA | retained_intron |
| -497641 | enst00000548742 | sg00000257653 | ac117498.2-201 | 12 | 48766194 | 48767323 | + | lnc_RNA | lncrna |
Source file: /hps/research1/birney/users/adrien/analyses/cancer_DNA_promethion/run_1_2_3_4/DNA_pipeline_2/results/methylation/pycometh_meth_comp_CGI_3/out.tsv.gz
MD5 hash: 9aa0e3f69cb4e12345c3758eb68a5efc